RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CDH7Q9ULB5 785 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 HBS1LQ9Y450 684 aaKnown RBP4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 KLK4Q9Y5K2 254 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 IL16Q14005 1332 aa4.89□□□□□ -1.63
SMARCE1-219ENST00000583294 A0A087WUV0 522 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 A0A087X002 238 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 A0A0U1RQK1 487 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ZNF320A2RRD8 509 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 OOEPA6NGQ2 149 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 E5RGE8 158 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 SLC30A4O14863 429 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 CTDSPLO15194 276 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 TEX28O15482 410 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 EDIL3O43854 480 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ZNF821O75541 412 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 IGLV1-44P01699 117 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 SP9P0CG40 484 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 DLATP10515 647 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 EEF2P13639 858 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 RPL35AP18077 110 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 CCND3P30281 292 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 PTPN14Q15678 1187 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ZFP69Q49AA0 526 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ANKRD20A4Q4UJ75 823 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ANKRD20A8PQ5CZ79 823 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ANKRD20A2Q5SQ80 823 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ANKRD20A1Q5TYW2 823 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ANKRD20A3Q5VUR7 823 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 LEKR1Q6ZMV7 388 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 GBP6Q6ZN66 633 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 PIWIL3Q7Z3Z3 882 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 CPEB2Q7Z5Q1 589 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ADAD2Q8NCV1 583 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 GRK7Q8WTQ7 553 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 VMP1Q96GC9 406 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 NEDD4LQ96PU5 975 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 UTP14AQ9BVJ6 771 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 ALDH8A1Q9H2A2 487 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 PRDM4Q9UKN5 801 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 PPP1R3CQ9UQK1 317 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 NSG2Q9Y328 171 aa4.88□□□□□ -1.63
SMARCE1-219ENST00000583294 TRAV18A0A075B6X5 111 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 A0A1W2PR80 420 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 FAM170AA1A519 330 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 SLCO1B7G3V0H7 640 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 STX6O43752 255 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 MAGEC1O60732 1142 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 CLDN1O95832 211 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 CD59P13987 128 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 ELAVL4P26378 380 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 KRT2P35908 639 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 TCF7P36402 384 aaPredicted RBP4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 SLC6A12P48065 614 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 NPBWR1P48145 328 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 XGP55808 180 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 SGCGQ13326 291 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 MEP1BQ16820 701 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 SGSM1Q2NKQ1 1148 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 ZNF542PQ5EBM4 170 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 FCRLAQ7L513 359 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 MEX3DQ86XN8 651 aaKnown RBP4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 CCDC60Q8IWA6 550 aaPredicted RBP4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 FAM9BQ8IZU0 186 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 SYCP3Q8IZU3 236 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 KIAA0895Q8NCT3 520 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 OR2T6Q8NHC8 308 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 NR4A3Q92570 626 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 NXPE2Q96DL1 559 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 CLEC7AQ9BXN2 247 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 TBC1D13Q9NVG8 400 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 VPS18Q9P253 973 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 SLC12A6Q9UHW9 1150 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 COLEC10Q9Y6Z7 277 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 MYH15Q9Y2K3 1946 aa4.87□□□□□ -1.63
SMARCE1-219ENST00000583294 MTMR11A4FU01 709 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 KBTBD13C9JR72 458 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 NME6O75414 186 aaPredicted RBP4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 VTNP04004 478 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 PIK3R1P27986 724 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 OPRL1P41146 370 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 SOX3P41225 446 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 CLDN17P56750 224 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 CSNK2BP67870 215 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 KRT83P78385 493 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 CDH18Q13634 790 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 SLMAPQ14BN4 828 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 IQCCQ4KMZ1 466 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 PODNL1Q6PEZ8 512 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 C11orf88Q6PI97 169 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 C5orf24Q7Z6I8 188 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 PRUNE1Q86TP1 453 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 ANKRD46Q86W74 232 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 IQCA1Q86XH1 822 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 GPC2Q8N158 579 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 FAM89BQ8N5H3 189 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 TMCO5AQ8N6Q1 288 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 TCEANCQ8N8B7 351 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 OR6S1Q8NH40 331 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 HCAR2Q8TDS4 363 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms