RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 KRT78Q8N1N4 520 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 MFSD9Q8NBP5 474 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 SLC46A1Q96NT5 459 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 OR2A5Q96R48 311 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 EFCAB11Q9BUY7 163 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 SHCBP1LQ9BZQ2 653 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 GSTO2Q9H4Y5 243 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 OXSMQ9NWU1 459 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 SERTAD3Q9UJW9 196 aa13.4□□□□□ -0.26
GGA3-216ENST00000583282 RUVBL1Q9Y265 456 aaKnown RBP13.4□□□□□ -0.26
GGA3-216ENST00000583282 SPTBP11277 2137 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 A0A1B0GTL3 188 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 CDRT15L2A8MXV6 281 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 HMGB1P1B2RPK0 211 aaPredicted RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 PPP6CO00743 305 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 FFAR3O14843 346 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 GPR42O15529 346 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 ZNF749O43361 778 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 LCMT2O60294 686 aaKnown RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 H2AFYO75367 372 aaKnown RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 NTRK1P04629 796 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 MSL3P1P0C860 447 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 IMPDH1P20839 514 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 ETV4P43268 484 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 SCTRP47872 440 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
GGA3-216ENST00000583282 PAGE2BQ5JRK9 111 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 HHATQ5VTY9 493 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 C1orf189Q5VU69 101 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 LETMD1Q6P1Q0 360 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 METTL2BQ6P1Q9 378 aaKnown RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 FRMD7Q6ZUT3 714 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 ZFAND4Q86XD8 727 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 DTWD1Q8N5C7 304 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 ANKRD53Q8N9V6 530 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 OR4F6Q8NGB9 312 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 OR4K1Q8NGD4 311 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 OR8K5Q8NH50 307 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 PPP1R14CQ8TAE6 165 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 GATA6Q92908 595 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 CLIP3Q96DZ5 547 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 NAF1Q96HR8 494 aaKnown RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 TEFMQ96QE5 360 aaKnown RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 C1QTNF3Q9BXJ4 246 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 ASPSCR1Q9BZE9 553 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 DRC3Q9H069 523 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 EHD1Q9H4M9 534 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 NKIRAS1Q9NYS0 192 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 DHCR7Q9UBM7 475 aaKnown RBP13.39□□□□□ -0.27
GGA3-216ENST00000583282 NDOR1Q9UHB4 597 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 RNF11Q9Y3C5 154 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 PCDHGA3Q9Y5H0 932 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 CACNA1AO00555 2505 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 KNTC1P50748 2209 aa13.39□□□□□ -0.27
GGA3-216ENST00000583282 FER1L5A0AVI2 2057 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 C1QTNF9BB2RNN3 333 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 H3BMH7 237 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 TRIM13O60858 407 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 SH3BGRLO75368 114 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 DXOO77932 396 aaKnown RBP13.38□□□□□ -0.27
GGA3-216ENST00000583282 OR4F21O95013 312 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 MED26O95402 600 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 OTCP00480 354 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 BPGMP07738 259 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 SLC35G6P0C7Q6 338 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 C1QTNF9P0C862 333 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 NEFHP12036 1026 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 CXCR2P25025 360 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 DNAJB13P59910 316 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 ASPHQ12797 758 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 LCP2Q13094 533 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 GRM7Q14831 915 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 CPSF6Q16630 551 aaKnown RBP eCLIP13.38□□□□□ -0.27
GGA3-216ENST00000583282 TCTE1Q5JU00 501 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 MED27Q6P2C8 311 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 TMIGD1Q6UXZ0 262 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 GPRIN3Q6ZVF9 776 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 SYVN1Q86TM6 617 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 RNF175Q8N4F7 328 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 GALNT6Q8NCL4 622 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 SREK1Q8WXA9 508 aaKnown RBP13.38□□□□□ -0.27
GGA3-216ENST00000583282 WDR34Q96EX3 536 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 C10orf90Q96M02 699 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 ZPBPQ9BS86 351 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 NDC1Q9BTX1 674 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 GATA5Q9BWX5 397 aaPredicted RBP13.38□□□□□ -0.27
GGA3-216ENST00000583282 NLNQ9BYT8 704 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 TXLNGQ9NUQ3 528 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 PCDHGA7Q9Y5G6 932 aa13.38□□□□□ -0.27
GGA3-216ENST00000583282 KCNE1BA0A087WTH5 132 aa13.37□□□□□ -0.27
GGA3-216ENST00000583282 CRCPO75575 148 aa13.37□□□□□ -0.27
GGA3-216ENST00000583282 CLDN9O95484 217 aa13.37□□□□□ -0.27
GGA3-216ENST00000583282 MLYCDO95822 493 aa13.37□□□□□ -0.27
GGA3-216ENST00000583282 BGNP21810 368 aa13.37□□□□□ -0.27
GGA3-216ENST00000583282 HNF4AP41235 474 aa13.37□□□□□ -0.27
GGA3-216ENST00000583282 ERVPABLB-1P60509 514 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms