RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SOX11P35716 441 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 RPL3P39023 403 aaKnown RBP21.81■■□□□ 1.08
CCDC47-204ENST00000582252 CCT8P50990 548 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 CHRNB3Q05901 458 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 UGT8Q16880 541 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 ANXA8L1Q5VT79 327 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 CAPRIN2Q6IMN6 1127 aaKnown RBP21.81■■□□□ 1.08
CCDC47-204ENST00000582252 GALNT18Q6P9A2 607 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 FKBP9P1Q75LS8 142 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 SYNPOQ8N3V7 929 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 SPDYE1Q8NFV5 336 aaPredicted RBP21.81■■□□□ 1.08
CCDC47-204ENST00000582252 CDC26Q8NHZ8 85 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 FIG4Q92562 907 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 BDH2Q9BUT1 245 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 PREBQ9HCU5 417 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 DMRT3Q9NQL9 472 aa21.81■■□□□ 1.08
CCDC47-204ENST00000582252 PCYT1BQ9Y5K3 369 aaPredicted RBP21.81■■□□□ 1.08
CCDC47-204ENST00000582252 VGLL3A8MV65 326 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 CXCR6O00574 342 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 FPGTO14772 594 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 PCDH7O60245 1069 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 RNGTTO60942 597 aaKnown RBP21.8■■□□□ 1.08
CCDC47-204ENST00000582252 ZCCHC18P0CG32 403 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 HOXB9P17482 250 aaPredicted RBP21.8■■□□□ 1.08
CCDC47-204ENST00000582252 CXCR2P25025 360 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 LRRC32Q14392 662 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 UGT2A3Q6UWM9 527 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 GCNT7Q6ZNI0 430 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 CAMKMTQ7Z624 323 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 CALHM3Q86XJ0 350 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 FAM162AQ96A26 154 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 RNF145Q96MT1 663 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 PANX1Q96RD7 426 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 SEPHS2Q99611 448 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 INPP5KQ9BT40 448 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 SLC17A9Q9BYT1 436 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 PELI2Q9HAT8 420 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 MMP17Q9ULZ9 603 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 OR1A2Q9Y585 309 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 PCM1Q15154 2024 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 GNG14A0A1W2PPG7 69 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 A0A1W2PQU0 124 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 DPPA5A6NC42 116 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 SAC3D1A6NKF1 404 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 EPN2O95208 641 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 RAE1P78406 368 aaKnown RBP21.8■■□□□ 1.08
CCDC47-204ENST00000582252 GTDC1Q4AE62 458 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 C6orf52Q5T4I8 152 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 ANKRD46Q86W74 232 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 C17orf64Q86WR6 236 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 UBALD2Q8IYN6 164 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 OR7A2PQ8NGA2 310 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 SNX19Q92543 992 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 REXO5Q96IC2 774 aaKnown RBP21.8■■□□□ 1.08
CCDC47-204ENST00000582252 CNBD2Q96M20 576 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 DUSP26Q9BV47 211 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 CHID1Q9BWS9 393 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 MKRN2Q9H000 416 aaKnown RBP21.8■■□□□ 1.08
CCDC47-204ENST00000582252 NCKAP1Q9Y2A7 1128 aa21.8■■□□□ 1.08
CCDC47-204ENST00000582252 DEAF1O75398 565 aaPredicted RBP21.79■■□□□ 1.08
CCDC47-204ENST00000582252 ETHE1O95571 254 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 RETP07949 1114 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 COL9A1P20849 921 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 ZNF763Q0D2J5 394 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 TMEM259Q4ZIN3 620 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 CPTPQ5TA50 214 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 HORMAD1Q86X24 394 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 MFSD2AQ8NA29 543 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 SMPDL3AQ92484 453 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 IKZF5Q9H5V7 419 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 FZD4Q9ULV1 537 aa21.79■■□□□ 1.08
CCDC47-204ENST00000582252 NUMA1Q14980 2115 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 RNF103-CHMP3A0A140T963 221 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 CHRNB1P11230 501 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 CKMT2P17540 419 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 PPIBP23284 216 aaKnown RBP21.78■■□□□ 1.08
CCDC47-204ENST00000582252 PTPN6P29350 595 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 SERPINB1P30740 379 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 ADPRHP54922 357 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 STARD6P59095 220 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 FGL2Q14314 439 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 OR52E8Q6IFG1 317 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 R3HCC1LQ7Z5L2 792 aaKnown RBP21.78■■□□□ 1.08
CCDC47-204ENST00000582252 GPR156Q8NFN8 814 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 FAM110BQ8TC76 370 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 NCLNQ969V3 563 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 IL17FQ96PD4 163 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 SLC29A1Q99808 456 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 CENPKQ9BS16 269 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 TBCDQ9BTW9 1192 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 PITHD1Q9GZP4 211 aaPredicted RBP21.78■■□□□ 1.08
CCDC47-204ENST00000582252 CXorf56Q9H5V9 222 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 ATAD3AQ9NVI7 634 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 BTNL2Q9UIR0 455 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 CORO2BQ9UQ03 480 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 SH2B3Q9UQQ2 575 aa21.78■■□□□ 1.08
CCDC47-204ENST00000582252 C7orf72A4D263 438 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 PRR23AA6NEV1 266 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 CACNB4O00305 520 aaPredicted RBP21.77■■□□□ 1.08
CCDC47-204ENST00000582252 TNFAIP8O95379 198 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms