RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SNX11Q9Y5W9 270 aa17.81■□□□□ 0.44
PRKCA-203ENST00000578063 NCOR1O75376 2440 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 GSAPA4D1B5 854 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 GSC2O15499 205 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 OR1F1O43749 312 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 NRP2O60462 931 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 GPR37L1O60883 481 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 SEMA3DO95025 777 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 UGT2B7P16662 529 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 POLR2CP19387 275 aaPredicted RBP17.8■□□□□ 0.44
PRKCA-203ENST00000578063 ITGAXP20702 1163 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 RXRGP48443 463 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 POLR2JP52435 117 aaKnown RBP17.8■□□□□ 0.44
PRKCA-203ENST00000578063 BIRC2Q13490 618 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 PTGR1Q14914 329 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 SLC5A12Q1EHB4 618 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 DEFB133Q30KQ1 61 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 KIAA1614Q5VZ46 1190 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 REP15Q6BDI9 236 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 OGFOD3Q6PK18 319 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 C16orf89Q6UX73 402 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 ANKRD53Q8N9V6 530 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 CHTF18Q8WVB6 975 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 SPDL1Q96EA4 605 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 TEX37Q96LM6 180 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 OR2A14Q96R47 310 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 DPY30Q9C005 99 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 MMADHCQ9H3L0 296 aaPredicted RBP17.8■□□□□ 0.44
PRKCA-203ENST00000578063 ANKMY1Q9P2S6 941 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 NDUFAF1Q9Y375 327 aa17.8■□□□□ 0.44
PRKCA-203ENST00000578063 ARHGEF17Q96PE2 2063 aaPredicted RBP17.79■□□□□ 0.44
PRKCA-203ENST00000578063 FEZF1A0PJY2 475 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 OR5K3A6NET4 321 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 LILRA5A6NI73 299 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 H0YHG0 523 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 ANGPT2O15123 496 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 TGFB1P01137 390 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 SDC1P18827 310 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 SLC25A3Q00325 362 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 BNC1Q01954 994 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 ART3Q13508 389 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 SIM2Q14190 667 aaPredicted RBP17.79■□□□□ 0.44
PRKCA-203ENST00000578063 GALNT18Q6P9A2 607 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 KLHL35Q6PF15 583 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 RABEPKQ7Z6M1 372 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 FAM20CQ8IXL6 584 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 C1orf52Q8N6N3 182 aaKnown RBP17.79■□□□□ 0.44
PRKCA-203ENST00000578063 PIGKQ92643 395 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 MS4A8Q9BY19 250 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 HRASLS2Q9NWW9 162 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 UCKL1Q9NWZ5 548 aa17.79■□□□□ 0.44
PRKCA-203ENST00000578063 ZDBF2Q9HCK1 2354 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 TNRC6BQ9UPQ9 1833 aaKnown RBP17.78■□□□□ 0.44
PRKCA-203ENST00000578063 A0A1W2PP18 115 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 FBP2O00757 339 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 MRASO14807 208 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 CLEC3AO75596 197 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 CAPN3P20807 821 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 TIA1P31483 386 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRKCA-203ENST00000578063 ZFP36L2P47974 494 aaKnown RBP17.78■□□□□ 0.44
PRKCA-203ENST00000578063 CLNS1AP54105 237 aaKnown RBP17.78■□□□□ 0.44
PRKCA-203ENST00000578063 C14orf28Q4W4Y0 310 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 SPESP1Q6UW49 350 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 PCYOX1LQ8NBM8 494 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 NPAS2Q99743 824 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 OR51B5Q9H339 312 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 AHSPQ9NZD4 102 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 KLK4Q9Y5K2 254 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 PCM1Q15154 2024 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 CCDC154A6NI56 674 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 HAT1O14929 419 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 ZW10O43264 779 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 IL12AP29459 219 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 AHRP35869 848 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 GRIA3P42263 894 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 CLDN8P56748 225 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 CYP4F2P78329 520 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 VPS26BQ4G0F5 336 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 C6orf132Q5T0Z8 1188 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 KHDRBS2Q5VWX1 349 aaKnown RBP17.78■□□□□ 0.44
PRKCA-203ENST00000578063 ARMC6Q6NXE6 501 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 HACD2Q6Y1H2 254 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 PAQR7Q86WK9 346 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 DSELQ8IZU8 1212 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 METTL4Q8N3J2 472 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 ZBTB44Q8NCP5 570 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 GPR156Q8NFN8 814 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 UTP4Q969X6 686 aaKnown RBP17.78■□□□□ 0.44
PRKCA-203ENST00000578063 CENPKQ9BS16 269 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 SLC52A3Q9NQ40 469 aa17.78■□□□□ 0.44
PRKCA-203ENST00000578063 C9JVG2 144 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 PPM1DO15297 605 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 TNFSF14O43557 240 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 PRMT3O60678 531 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 SH3BGRLO75368 114 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 SP9P0CG40 484 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 AVPR2P30518 371 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 PGM1P36871 562 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 BCL6P41182 706 aa17.77■□□□□ 0.44
PRKCA-203ENST00000578063 RPS15AP62244 130 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms