RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 FPGTO14772 594 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 EPHB6O15197 1021 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 IGHDP01880 384 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 FYNP06241 537 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 EPCAMP16422 314 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 CYP2A7P20853 494 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 ANP32AP39687 249 aaKnown RBP4.51□□□□□ -1.69
NUP88-213ENST00000576862 OPRL1P41146 370 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 RAB28P51157 221 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 PAX9P55771 341 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 CSNK2BP67870 215 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 DRP2Q13474 957 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 NPTX1Q15818 432 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 TTC31Q49AM3 519 aaPredicted RBP4.51□□□□□ -1.69
NUP88-213ENST00000576862 TCTE1Q5JU00 501 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 LCN1P1Q5VSP4 162 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 ARMC3Q5W041 872 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 ZNF772Q68DY9 489 aaPredicted RBP4.51□□□□□ -1.69
NUP88-213ENST00000576862 SLC30A6Q6NXT4 461 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 CCDC73Q6ZRK6 1079 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 MYPOPQ86VE0 399 aaPredicted RBP4.51□□□□□ -1.69
NUP88-213ENST00000576862 GATAD1Q8WUU5 269 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 ROBO4Q8WZ75 1007 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 WBP1Q96G27 269 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 C4orf45Q96LM5 186 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 NECTIN4Q96NY8 510 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 MCRIP2Q9BUT9 160 aaKnown RBP4.51□□□□□ -1.69
NUP88-213ENST00000576862 ZMYND12Q9H0C1 365 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 ST6GALNAC4Q9H4F1 302 aa4.51□□□□□ -1.69
NUP88-213ENST00000576862 PPANQ9NQ55 473 aaKnown RBP4.51□□□□□ -1.69
NUP88-213ENST00000576862 CAMSAP1Q5T5Y3 1602 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 SPHKAPQ2M3C7 1700 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 ADGRB1O14514 1584 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 ZFYVE9O95405 1425 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 IGLV7-46A0A075B6I9 117 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 A0A1W2PR80 420 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 ANTXRLA6NF34 631 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 TRIM64CA6NLI5 447 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 AP5Z1O43299 807 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 DCXO43602 365 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 TBX10O75333 385 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 ATP6AP2O75787 350 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 LHCGRP22888 699 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 OAS2P29728 719 aaKnown RBP4.5□□□□□ -1.69
NUP88-213ENST00000576862 UBASH3AP57075 661 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 ROR1Q01973 937 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 HLA-BQ31612 363 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 GPR33Q49SQ1 333 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 SLC10A5Q5PT55 438 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 KRT39Q6A163 491 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 NBPF5PQ86XG9 351 aaPredicted RBP4.5□□□□□ -1.69
NUP88-213ENST00000576862 ANKRD13CQ8N6S4 541 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 TEX9Q8N6V9 391 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 KLHDC1Q8N7A1 406 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 GPRC5AQ8NFJ5 357 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 ARHGAP45Q92619 1136 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 CENPTQ96BT3 561 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 C18orf12Q96KH6 178 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 KRT12Q99456 494 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 FGFBP2Q9BYJ0 223 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 CHST11Q9NPF2 352 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 EPS15L1Q9UBC2 864 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 MAN1B1Q9UKM7 699 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 PPP1R3CQ9UQK1 317 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 R4GN57 208 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 EIF3AQ14152 1382 aaKnown RBP4.5□□□□□ -1.69
NUP88-213ENST00000576862 LAMC1P11047 1609 aa4.5□□□□□ -1.69
NUP88-213ENST00000576862 CEP152O94986 1710 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 SIGLEC1Q9BZZ2 1709 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 A0A0J9YWU9 116 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 TRBV5-5A0A0J9YX44 114 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 MEX3AA1L020 520 aaKnown RBP4.49□□□□□ -1.69
NUP88-213ENST00000576862 A8MXE2 369 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 DIAPH2O60879 1101 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 SORBS2O94875 1100 aaKnown RBP4.49□□□□□ -1.69
NUP88-213ENST00000576862 NXPH2O95156 264 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 BAG2O95816 211 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 TPM2P07951 284 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 ZSCAN5DPP0CG00 497 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 SLC2A2P11168 524 aaPredicted RBP4.49□□□□□ -1.69
NUP88-213ENST00000576862 KRT20P35900 424 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 SSR1P43307 286 aaKnown RBP4.49□□□□□ -1.69
NUP88-213ENST00000576862 ZNF74Q16587 644 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 LPAL2Q16609 132 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 HSP90AB3PQ58FF7 597 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 OR4A47Q6IF82 309 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 FAAP20Q6NZ36 180 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 ZNF440Q8IYI8 595 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 RASGEF1AQ8N9B8 481 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.49□□□□□ -1.69
NUP88-213ENST00000576862 OR6J1Q8NGC5 347 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 AFAP1L1Q8TED9 768 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 SPSB1Q96BD6 273 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 ZNF486Q96H40 463 aaPredicted RBP4.49□□□□□ -1.69
NUP88-213ENST00000576862 ATOH8Q96SQ7 321 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 IWS1Q96ST2 819 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 MAP3K3Q99759 626 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 AP1M1Q9BXS5 423 aa4.49□□□□□ -1.69
NUP88-213ENST00000576862 TRIM15Q9C019 465 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms