RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RNF224P0DH78 156 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 HIST1H2ADP20671 130 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 GNLYP22749 145 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 TAS2R39P59534 338 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 NAE1Q13564 534 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 UBAP2LQ14157 1087 aaKnown RBP16.42■□□□□ 0.22
SMG6-212ENST00000573153 TUBB8Q3ZCM7 444 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 THEMIS2Q5TEJ8 643 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 CUZD1Q86UP6 607 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 PDSS2Q86YH6 399 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 PRSS58Q8IYP2 241 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 NKAPQ8N5F7 415 aaKnown RBP16.42■□□□□ 0.22
SMG6-212ENST00000573153 GALNT11Q8NCW6 608 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 ABHD11Q8NFV4 315 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 OR4K1Q8NGD4 311 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 ANKRD49Q8WVL7 239 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 RERGQ96A58 199 aaPredicted RBP16.42■□□□□ 0.22
SMG6-212ENST00000573153 MIEF2Q96C03 454 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 FBXL8Q96CD0 374 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 C19orf60Q96EN9 201 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 HIST1H2AHQ96KK5 128 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 HIST1H2AJQ99878 128 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 H2AFJQ9BTM1 129 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 FAM129AQ9BZQ8 928 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 DPH5Q9H2P9 285 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 C3orf18Q9UK00 162 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 CDC14AQ9UNH5 594 aa16.42■□□□□ 0.22
SMG6-212ENST00000573153 UTP11Q9Y3A2 253 aaKnown RBP16.42■□□□□ 0.22
SMG6-212ENST00000573153 NBPF19A0A087WUL8 3843 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 FAM95CA0A1B0GW59 222 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 IDSB3KWA1 339 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 JRKO75564 520 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 CDH1P12830 882 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 SOX11P35716 441 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 RPS15AP62244 130 aaKnown RBP16.41■□□□□ 0.22
SMG6-212ENST00000573153 RBBP7Q16576 425 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 TMEM205Q6UW68 189 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 C17orf64Q86WR6 236 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 CEP97Q8IW35 865 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 ATL1Q8WXF7 558 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 PYCR2Q96C36 320 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 SNRNP40Q96DI7 357 aaKnown RBP16.41■□□□□ 0.22
SMG6-212ENST00000573153 HAUS8Q9BT25 410 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 TRIM54Q9BYV2 358 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 DRC3Q9H069 523 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 SAYSD1Q9NPB0 183 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 ARL15Q9NXU5 204 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 TRPC4Q9UBN4 977 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 G3BP2Q9UN86 482 aaKnown RBP16.41■□□□□ 0.22
SMG6-212ENST00000573153 B3GNT3Q9Y2A9 372 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 PCDHGA10Q9Y5H3 936 aa16.41■□□□□ 0.22
SMG6-212ENST00000573153 IGHV1-45A0A0A0MS14 117 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 FEZF1A0PJY2 475 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 FAM159BA6NKW6 160 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 CXorf49A8MYA2 514 aaPredicted RBP16.4■□□□□ 0.22
SMG6-212ENST00000573153 CDC7O00311 574 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 PRPF4O43172 522 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMG6-212ENST00000573153 KLHL41O60662 606 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 KLHL18O94889 574 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 BMP10O95393 424 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 NSA2O95478 260 aaKnown RBP16.4■□□□□ 0.22
SMG6-212ENST00000573153 HPP00738 406 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 CELA2AP08217 269 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 ITGA3P26006 1051 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 CDKL1Q00532 357 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 CKAP4Q07065 602 aaKnown RBP16.4■□□□□ 0.22
SMG6-212ENST00000573153 PCOLCEQ15113 449 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 TRADDQ15628 312 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 CAPN13Q6MZZ7 669 aaPredicted RBP16.4■□□□□ 0.22
SMG6-212ENST00000573153 ADCK2Q7Z695 626 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 PARP9Q8IXQ6 854 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 AFAP1L2Q8N4X5 818 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 KCT2Q8NC54 265 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 ZNF740Q8NDX6 193 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 OR9A4Q8NGU2 314 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 MOCOSQ96EN8 888 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 MMABQ96EY8 250 aaPredicted RBP16.4■□□□□ 0.22
SMG6-212ENST00000573153 VPS39Q96JC1 886 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 AICDAQ9GZX7 198 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 MKKSQ9NPJ1 570 aaPredicted RBP16.4■□□□□ 0.22
SMG6-212ENST00000573153 C14orf105Q9NVL8 296 aa16.4■□□□□ 0.22
SMG6-212ENST00000573153 TCRBV9S1A1TA0A576 114 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 TCP11X1B4DZS4 312 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 H0YIG0 161 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 DNAJB6O75190 326 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 ACPPP15309 386 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 SSTR1P30872 391 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 GPX6P59796 221 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 POU4F1Q01851 419 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 OCA2Q04671 838 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 CATSPEREQ5SY80 951 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 ZDHHC24Q6UX98 284 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 MFSD9Q8NBP5 474 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 FBXO25Q8TCJ0 367 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 PPP4R1Q8TF05 950 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 CDKL2Q92772 493 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 CPNE1Q99829 537 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 ZNF160Q9HCG1 818 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 CPAMD8Q8IZJ3 1885 aa16.39■□□□□ 0.21
SMG6-212ENST00000573153 USP9YO00507 2555 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms