RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RNF113BQ8IZP6 322 aaKnown RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 CRYBG2Q8N1P7 616 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 MAB21L3Q8N8X9 362 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 STKLD1Q8NE28 680 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ANKRD20A12PQ8NF67 263 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 TAS1R2Q8TE23 839 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 DEPDC1BQ8WUY9 529 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 MRPS31Q92665 395 aaKnown RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 EXOC4Q96A65 974 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ZUFSPQ96AP4 578 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 EEF2KMTQ96G04 330 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 SMARCD1Q96GM5 515 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 PCED1BQ96HM7 432 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 PPP1R13BQ96KQ4 1090 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 SPATA17Q96L03 361 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 RTP3Q9BQQ7 232 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 MRPL45Q9BRJ2 306 aaKnown RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 MED10Q9BTT4 135 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 PI4K2AQ9BTU6 479 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 TRMT61BQ9BVS5 477 aaKnown RBP3.87□□□□□ -1.79
NUP88-202ENST00000570937 C1QTNF5Q9BXJ0 243 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 MMP28Q9H239 520 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 FBXO44Q9H4M3 255 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 THAP9Q9H5L6 903 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 HCFC1R1Q9NWW0 138 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 COMMD8Q9NX08 183 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ABI3Q9P2A4 366 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 KIAA1257Q9ULG3 409 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 DUSP12Q9UNI6 340 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 CAMK2AQ9UQM7 478 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 AMDHD2Q9Y303 409 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ADAM18Q9Y3Q7 739 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 ZNF711Q9Y462 761 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 CAPN7Q9Y6W3 813 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 PTPRJQ12913 1337 aa3.87□□□□□ -1.79
NUP88-202ENST00000570937 MYO7AQ13402 2215 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 MUC3AQ02505 3323 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TRAV19A0A0A6YYK7 116 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ASPDHA6ND91 283 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TRIM49BA6NDI0 452 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 NPIPB15A6NHN6 443 aaPredicted RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 ZNF263O14978 683 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 XPNPEP2O43895 674 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 SEC14L2O76054 403 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 NOL4O94818 638 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 FAM200BP0CF97 657 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TRIM49P0CI25 452 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TRIM49CP0CI26 452 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 UBL4AP11441 157 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 CDH1P12830 882 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 GLULP15104 373 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 PSMC3P17980 439 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ATF6P18850 670 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ANOS1P23352 680 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 GABRR2P28476 465 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 MTIF2P46199 727 aaKnown RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 FMO5P49326 533 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 NDST1P52848 882 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 CDH8P55286 799 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 CSNK2A1P68400 391 aaPredicted RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 NTHL1P78549 312 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 GOLGA8DPQ0D2H9 430 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 INCA1Q0VD86 236 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TEAD2Q15562 447 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 CXorf66Q5JRM2 361 aaPredicted RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 FAM78AQ5JUQ0 283 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 CCDC183Q5T5S1 534 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 SIGIRRQ6IA17 410 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TTI2Q6NXR4 508 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 GDPD4Q6W3E5 623 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 SCARA5Q6ZMJ2 495 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ENOSF1Q7L5Y1 443 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 CACNA2D4Q7Z3S7 1137 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ACOT1Q86TX2 421 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ARID3BQ8IVW6 561 aaPredicted RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 MFSD6LQ8IWD5 586 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 DCUN1D3Q8IWE4 304 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ODF3L1Q8IXM7 274 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ZC3H3Q8IXZ2 948 aaKnown RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.86□□□□□ -1.79
NUP88-202ENST00000570937 CMTM8Q8IZV2 173 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 NUP93Q8N1F7 819 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 PCDH20Q8N6Y1 951 aaKnown RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 CSNK2A3Q8NEV1 391 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 SLC20A1Q8WUM9 679 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ING5Q8WYH8 240 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 SLC35C1Q96A29 364 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 MYLPFQ96A32 169 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 JAKMIP2Q96AA8 810 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 MSANTD3Q96H12 275 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 MYADMQ96S97 322 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 PKMYT1Q99640 499 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 HNRNPABQ99729 332 aaKnown RBP3.86□□□□□ -1.79
NUP88-202ENST00000570937 NACA2Q9H009 215 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 SMYD3Q9H7B4 428 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 KIF9Q9HAQ2 790 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TRPV4Q9HBA0 871 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 LRRC4Q9HBW1 653 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 SDF2L1Q9HCN8 221 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 DMAP1Q9NPF5 467 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms