RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MAP6Q96JE9 813 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 ZNF300Q96RE9 604 aaPredicted RBP10.58□□□□□ -0.72
PALB2-206ENST00000568219 RIMKLBQ9ULI2 386 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 CMAHPQ9Y471 501 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 SESN1Q9Y6P5 492 aa10.58□□□□□ -0.72
PALB2-206ENST00000568219 DOT1LQ8TEK3 1739 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 INMT-MINDY4F8WBC2 141 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 SEPT4O43236 478 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 ANXA4P09525 319 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 GPC1P35052 558 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 ITGA1P56199 1179 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 FLYWCH1Q4VC44 716 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 ATP13A5Q4VNC0 1218 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 ATXN7L2Q5T6C5 722 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 GORASP2Q9H8Y8 452 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 MCUBQ9NWR8 336 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 SLC22A14Q9Y267 594 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 MANBAO00462 879 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 STX16O14662 325 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 PAPSS2O95340 614 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 ERP29P30040 261 aaKnown RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 PIK3CBP42338 1070 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 PPM1FP49593 454 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 ARHGAP1Q07960 439 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 SCAPQ12770 1279 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 BCL2A1Q16548 175 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 LRRC73Q5JTD7 316 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 HMGN2P46Q86SG4 172 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 GALNT13Q8IUC8 556 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 RIMKLAQ8IXN7 391 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 ATP6V1C2Q8NEY4 427 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 B3GNT7Q8NFL0 401 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 SMG7Q92540 1137 aaKnown RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 PAWRQ96IZ0 340 aaKnown RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 TMED9Q9BVK6 235 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 RACGAP1Q9H0H5 632 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 FAM105AQ9NUU6 356 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 GFRA2O00451 464 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 ANKRD28O15084 1053 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 TACR1P25103 407 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 MFSD10Q14728 455 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 TATDN3Q17R31 274 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 RNF219Q5W0B1 726 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 MON1AQ86VX9 555 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 C2orf73Q8N5S3 287 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 ASB15Q8WXK1 588 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 OTUB1Q96FW1 271 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 C11orf84Q9BUA3 381 aaPredicted RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 CDADC1Q9BWV3 514 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 RNF121Q9H920 327 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 MRM3Q9HC36 420 aaKnown RBP10.57□□□□□ -0.72
PALB2-206ENST00000568219 VNN3Q9NY84 501 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 CLCA2Q9UQC9 943 aa10.57□□□□□ -0.72
PALB2-206ENST00000568219 MAST2Q6P0Q8 1798 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 ESR1P03372 595 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 NUDT7P0C024 238 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 ANXA8P13928 327 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 PRKACAP17612 351 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 PTNP21246 168 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 SDC2P34741 201 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 POU6F2P78424 691 aaPredicted RBP10.56□□□□□ -0.72
PALB2-206ENST00000568219 GPLD1P80108 840 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 PPIGQ13427 754 aaKnown RBP eCLIP10.56□□□□□ -0.72
PALB2-206ENST00000568219 COL9A2Q14055 689 aaPredicted RBP10.56□□□□□ -0.72
PALB2-206ENST00000568219 SPHARQ15513 63 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 EXOC3L2Q2M3D2 409 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 KDELC1Q6UW63 502 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 FAM109AQ8N4B1 249 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 HJURPQ8NCD3 748 aaPredicted RBP10.56□□□□□ -0.72
PALB2-206ENST00000568219 TMEM40Q8WWA1 233 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 AP3S1Q92572 193 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 IGSF8Q969P0 613 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 CDCA5Q96FF9 252 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 MUTYHQ9UIF7 546 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 DLGAP4Q9Y2H0 992 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 GRIP1Q9Y3R0 1128 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 ADAMTSL3P82987 1691 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 LOC102723532A0A0G2JNH3 316 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 PRR23AA6NEV1 266 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 HMX3A6NHT5 357 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 SLC30A4O14863 429 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 MTX2O75431 263 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 SSTR2P30874 369 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 MAP2K3P46734 347 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 TARDBPQ13148 414 aaKnown RBP eCLIP10.56□□□□□ -0.72
PALB2-206ENST00000568219 ANGPT1Q15389 498 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 IFI44LQ53G44 452 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 IDNKQ5T6J7 187 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 KIAA0319Q5VV43 1072 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 ATG9BQ674R7 924 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 PM20D1Q6GTS8 502 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 IQCF2Q8IXL9 164 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 PPTC7Q8NI37 304 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 DUSP26Q9BV47 211 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 TEX12Q9BXU0 123 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 FBXO44Q9H4M3 255 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 DUSP21Q9H596 190 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 SLA2Q9H6Q3 261 aa10.56□□□□□ -0.72
PALB2-206ENST00000568219 GJD2Q9UKL4 321 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms