RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 AVPR1BP47901 424 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 CCR8P51685 355 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 PGGT1BP53609 377 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 AP1S2P56377 157 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 TBPL1P62380 186 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 ETF1P62495 437 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 CSNK1G2P78368 415 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 MRPS25P82663 173 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 ILF2Q12905 390 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 CALCOCO2Q13137 446 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 UBAP2LQ14157 1087 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 FASTKD3Q14CZ7 662 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 INPP5JQ15735 1006 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 PHKG1Q16816 387 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 TUBB8Q3ZCM7 444 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 VWA2Q5GFL6 755 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 AGAP7PQ5VUJ5 663 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 IRAK1BP1Q5VVH5 260 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 ATG9BQ674R7 924 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 SLC6A19Q695T7 634 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 LCTLQ6UWM7 567 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 TMEM207Q6UWW9 146 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 NDUFAF7Q7L592 441 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 ZBED8Q8IZ13 594 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 NKAPQ8N5F7 415 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 AMER3Q8N944 861 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 CAMKVQ8NCB2 501 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 GALNT11Q8NCW6 608 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 SPATA4Q8NEY3 305 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 OR56A3Q8NH54 315 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 ANKRD7Q92527 254 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 TM9SF4Q92544 642 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 FBXL8Q96CD0 374 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 TM4SF19Q96DZ7 209 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 THOC3Q96J01 351 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 VPS39Q96JC1 886 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 AGAP4Q96P64 663 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 OLFM1Q99784 485 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 TGIF2Q9GZN2 237 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 LHPPQ9H008 270 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 DPH5Q9H2P9 285 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 SAYSD1Q9NPB0 183 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 MKKSQ9NPJ1 570 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 C14orf105Q9NVL8 296 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 NSMCE4AQ9NXX6 385 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 VPS4AQ9UN37 437 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 NOVA2Q9UNW9 492 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 B3GNT3Q9Y2A9 372 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 UTP11Q9Y3A2 253 aaKnown RBP6.57□□□□□ -1.36
SF3B3-209ENST00000567635 MAP4K5Q9Y4K4 846 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 CPAMD8Q8IZJ3 1885 aa6.57□□□□□ -1.36
SF3B3-209ENST00000567635 MAST4O15021 2626 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 FAM95CA0A1B0GW59 222 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 FEZF1A0PJY2 475 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 IDSB3KWA1 339 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 H0YIG0 161 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 MAP2K7O14733 419 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 FFAR3O14843 346 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 PCDH17O14917 1159 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 GPR42O15529 346 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 P2RX6O15547 441 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 RAD51CO43502 376 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 OR1F1O43749 312 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 SORBS2O94875 1100 aaKnown RBP6.56□□□□□ -1.36
SF3B3-209ENST00000567635 GUCA1CO95843 209 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 HPP00738 406 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 STATHP02808 62 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 GSTA2P09210 222 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 ACPPP15309 386 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 SSTR1P30872 391 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 BCL6P41182 706 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 SLC12A2P55011 1212 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 TAS2R39P59534 338 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 POU4F1Q01851 419 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 CAV1Q03135 178 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 Q0VFX4 171 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 CSHL1Q14406 222 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 ZXDCQ2QGD7 858 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-209ENST00000567635 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-209ENST00000567635 FAAH2Q6GMR7 532 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 SYT10Q6XYQ8 523 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 C3orf62Q6ZUJ4 267 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 CYS1Q717R9 158 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 VN1R4Q7Z5H5 301 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 KBTBD2Q8IY47 623 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 IQCKQ8N0W5 287 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 TBC1D19Q8N5T2 526 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 Q8NA96 180 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 MFSD9Q8NBP5 474 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 KCT2Q8NC54 265 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 ABHD11Q8NFV4 315 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 OR4K1Q8NGD4 311 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 OR9A4Q8NGU2 314 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 KIF18AQ8NI77 898 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 SLC13A3Q8WWT9 602 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 PYCR2Q96C36 320 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 C16orf45Q96MC5 204 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-209ENST00000567635 LMF1Q96S06 567 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 MACROD1Q9BQ69 325 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 RHOJQ9H4E5 214 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms