RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 F9P00740 461 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 CDK1P06493 297 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 COL6A1P12109 1028 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 AKT1P31749 480 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 ZNF267Q14586 743 aaPredicted RBP15.76■□□□□ 0.11
LINC00554-201ENST00000564841 TBCEQ15813 527 aaPredicted RBP15.76■□□□□ 0.11
LINC00554-201ENST00000564841 RAB41Q5JT25 222 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 SUSD1Q6UWL2 747 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 DNAJC22Q8N4W6 341 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 LRRC20Q8TCA0 184 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 CCM2Q9BSQ5 444 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 AARSD1Q9BTE6 412 aaKnown RBP15.76■□□□□ 0.11
LINC00554-201ENST00000564841 CCDC32Q9BV29 185 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 FKBP14Q9NWM8 211 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 THUMPD1Q9NXG2 353 aaKnown RBP15.76■□□□□ 0.11
LINC00554-201ENST00000564841 PCDHB7Q9Y5E2 793 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 MROH6A6NGR9 719 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 TRIM77I1YAP6 450 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 MMP2P08253 660 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 M6PRP20645 277 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 CST5P28325 142 aaPredicted RBP15.76■□□□□ 0.11
LINC00554-201ENST00000564841 GDF5P43026 501 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 SLC9A3P48764 834 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 LIMK1P53667 647 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 TMPRSS11AQ6ZMR5 421 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 SCD5Q86SK9 330 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 ADAMTSL2Q86TH1 951 aa15.76■□□□□ 0.11
LINC00554-201ENST00000564841 UTP15Q8TED0 518 aaKnown RBP15.76■□□□□ 0.11
LINC00554-201ENST00000564841 NUSAP1Q9BXS6 441 aaKnown RBP15.76■□□□□ 0.11
LINC00554-201ENST00000564841 IRAK2O43187 625 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 RETP07949 1114 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 NAGAP17050 411 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 ETV6P41212 452 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 SOX3P41225 446 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 GZMKP49863 264 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 PIK3R6Q5UE93 754 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 AADATQ8N5Z0 425 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 ST13P5Q8NFI4 369 aaPredicted RBP15.75■□□□□ 0.11
LINC00554-201ENST00000564841 OR52J3Q8NH60 311 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 TPD52L3Q96J77 140 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 C1QTNF7Q9BXJ2 289 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 DPY30Q9C005 99 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 RLIMQ9NVW2 624 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 RWDD3Q9Y3V2 267 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 CLCA1A8K7I4 914 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 M0QZQ0 153 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 LRATO95237 230 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 POU2F1P14859 743 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 TNFRSF1BP20333 461 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 AQP1P29972 269 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 ACVRL1P37023 503 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 SOX9P48436 509 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 NFE2L1Q14494 772 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 CYP27C1Q4G0S4 372 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 PDE12Q6L8Q7 609 aaKnown RBP15.75■□□□□ 0.11
LINC00554-201ENST00000564841 PRSS55Q6UWB4 352 aaPredicted RBP15.75■□□□□ 0.11
LINC00554-201ENST00000564841 TIGD4Q8IY51 512 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 SDR16C5Q8N3Y7 309 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 OR8H1Q8NGG4 311 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 SLC39A13Q96H72 371 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 FRMD6Q96NE9 622 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 ACAT2Q9BWD1 397 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 SPASTQ9UBP0 616 aa15.75■□□□□ 0.11
LINC00554-201ENST00000564841 TSPAN4O14817 238 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 MUSKO15146 869 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 GUCA1CO95843 209 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 DNAJA1P31689 397 aaKnown RBP15.74■□□□□ 0.11
LINC00554-201ENST00000564841 DMC1Q14565 340 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 VEPH1Q14D04 833 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 SSX1Q16384 188 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 TCTN1Q2MV58 587 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 FAM131AQ6UXB0 335 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 ASPNQ9BXN1 380 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 SRRQ9GZT4 340 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 OGDHLQ9ULD0 1010 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 HSPE1-MOB4S4R3N1 261 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 TSC2P49815 1807 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 MOXD2PA6NHM9 499 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 I3L521 148 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 SHOXO15266 292 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 OR7A10O76100 309 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 CKMT1AP12532 417 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 DOK6Q6PKX4 331 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 TAS1R1Q7RTX1 841 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 RNF208Q9H0X6 261 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 ABCB9Q9NP78 766 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 IL1RAPQ9NPH3 570 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 MALT1Q9UDY8 824 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 C5orf42Q9H799 3197 aa15.74■□□□□ 0.11
LINC00554-201ENST00000564841 ARHGEF9O43307 516 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 ICAM2P13598 275 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 FPR1P21462 350 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 TIE1P35590 1138 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 MRPL19P49406 292 aaKnown RBP15.73■□□□□ 0.11
LINC00554-201ENST00000564841 GZMMP51124 257 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 TATDN3Q17R31 274 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 REPS1Q96D71 796 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 MSANTD3Q96H12 275 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 MGLLQ99685 303 aa15.73■□□□□ 0.11
LINC00554-201ENST00000564841 C17orf62Q9BQA9 187 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms