RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 INTS6Q9UL03 887 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 MN1Q10571 1320 aaPredicted RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 TMEM189-UBE2V1I3L0A0 370 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 RGS10O43665 173 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 XPNPEP2O43895 674 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 TYRP14679 529 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 HOXB6P17509 224 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 ASMTP46597 345 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 BDKRB1P46663 353 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 CTU2Q2VPK5 515 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 ZNF691Q5VV52 312 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 DEF8Q6ZN54 512 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 HS3ST5Q8IZT8 346 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 TEX26Q8N6G2 289 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 CHAC2Q8WUX2 184 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 XAGE5Q8WWM1 108 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 IMP3Q9NV31 184 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 PAK1IP1Q9NWT1 392 aaPredicted RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 SATB2Q9UPW6 733 aa10.13□□□□□ -0.79
RNF40-204ENST00000563683 CFAP20Q9Y6A4 193 aaKnown RBP10.13□□□□□ -0.79
RNF40-204ENST00000563683 CACNG3O60359 315 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TCF3P15923 654 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 ETV3P41162 512 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 ISL1P61371 349 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 SYT16Q17RD7 645 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PYCR3Q53H96 274 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 SYT6Q5T7P8 510 aaPredicted RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 SDE2Q6IQ49 451 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 BHLHA9Q7RTU4 235 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 GALNT13Q8IUC8 556 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 KLHDC8BQ8IXV7 354 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TRIM63Q969Q1 353 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 LGALS12Q96DT0 336 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 YIPF6Q96EC8 236 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 MBOAT4Q96T53 435 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 NUAK2Q9H093 628 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TRIT1Q9H3H1 467 aaKnown RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 CCDC177Q9NQR7 707 aaPredicted RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 RAD18Q9NS91 495 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 NPAP1Q9NZP6 1156 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PRKAB1Q9Y478 270 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 KMOO15229 486 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TBX1O43435 398 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 MRPS14O60783 128 aaKnown RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 NR2F1P10589 423 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 MTHFD2P13995 350 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 KRT20P35900 424 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 CDC42P60953 191 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 ZNF45Q02386 682 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 CREMQ03060 361 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 ZNF404Q494X3 552 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNF40-204ENST00000563683 ZNF544Q6NX49 715 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 ERICH5Q6P6B1 374 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 AGTRAPQ6RW13 159 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 SUSD1Q6UWL2 747 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 THOC6Q86W42 341 aaKnown RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 C17orf64Q86WR6 236 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TRIM69Q86WT6 500 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 OR4K1Q8NGD4 311 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PROKR1Q8TCW9 393 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 POP5Q969H6 163 aaKnown RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 UBE2E3Q969T4 207 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PPP1R16AQ96I34 528 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TEX37Q96LM6 180 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 ZNF300Q96RE9 604 aaPredicted RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 AMBRA1Q9C0C7 1298 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 MTG2Q9H4K7 406 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 SLC52A3Q9NQ40 469 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 FZD4Q9ULV1 537 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 OARD1Q9Y530 152 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PNMA8CA0A1B0GUJ8 204 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PCDH7O60245 1069 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 GUCY1B2O75343 617 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 EPHX1P07099 455 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PPIBP23284 216 aaKnown RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 DGKGP49619 791 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 SEPHS1P49903 392 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PPP2R2BQ00005 443 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 CAP1Q01518 475 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 MEF2AQ02078 507 aaPredicted RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 CDK5R2Q13319 367 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 NPTX1Q15818 432 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PPP2R2DQ66LE6 453 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 USP43Q70EL4 1123 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 GALNT7Q86SF2 657 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 Q8N9G6 341 aaPredicted RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 ASCC1Q8N9N2 400 aaKnown RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 OR8D1Q8WZ84 308 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 EXOSC8Q96B26 276 aaKnown RBP10.12□□□□□ -0.79
RNF40-204ENST00000563683 SNX18Q96RF0 628 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 CLSTN3Q9BQT9 956 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TUBB1Q9H4B7 451 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 CERS4Q9HA82 394 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TDP1Q9NUW8 608 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 ANGPT4Q9Y264 503 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 KLHL20Q9Y2M5 609 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 FAM92AA1XBS5 289 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 BMPR1AP36894 532 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 E2F2Q14209 437 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms