RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ZNF30P17039 623 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 ITPKAP23677 461 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 CD70P32970 193 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 MAPK9P45984 424 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 PNLIPRP1P54315 467 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 SLC7A9P82251 487 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 CAP1Q01518 475 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 TBCEQ15813 527 aaPredicted RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 HKDC1Q2TB90 917 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 XKR6Q5GH73 641 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 TXNDC8Q6A555 127 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 C22orf39Q6P5X5 142 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 THOC6Q86W42 341 aaKnown RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 PXYLP1Q8TE99 480 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 BHMTQ93088 406 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 COQ8BQ96D53 544 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 LMLNQ96KR4 655 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 FAM83CQ9BQN1 747 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 DOHHQ9BU89 302 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 EBPLQ9BY08 206 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 TMPRSS11EQ9UL52 423 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 PCDHGA6Q9Y5G7 932 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 COL4A6Q14031 1691 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 EFCAB9A8MZ26 197 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 TAF4O00268 1085 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 PCDHGA12O60330 932 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 PSIP1O75475 530 aaKnown RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 SLCO2B1O94956 709 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 LAMP1P11279 417 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 BMP1P13497 986 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 ANXA8P13928 327 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 GGT2P36268 569 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 DCDC1P59894 354 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 CREMQ03060 361 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 RBBP4Q09028 425 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 DGCR6Q14129 220 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 RGNQ15493 299 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 SMN1Q16637 294 aaKnown RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 SPIN4Q56A73 249 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 PERM1Q5SV97 790 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 CPTPQ5TA50 214 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 PLEKHG7Q6ZR37 379 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 CCDC71Q8IV32 467 aaPredicted RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 NPAS3Q8IXF0 933 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 SLC22A15Q8IZD6 547 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 CLECL1Q8IZS7 167 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 C11orf65Q8NCR3 313 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 APH1BQ8WW43 257 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 ELMO1Q92556 727 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 MRPS31Q92665 395 aaKnown RBP12.64□□□□□ -0.39
USB1-207ENST00000563149 ATG10Q9H0Y0 220 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 DSN1Q9H410 356 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 RUBCNLQ9H714 662 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 SP140LQ9H930 580 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 RAD18Q9NS91 495 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 FKBP14Q9NWM8 211 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 PSORS1C1Q9UIG5 152 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 SLC25A13Q9UJS0 675 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 VPS4AQ9UN37 437 aa12.64□□□□□ -0.39
USB1-207ENST00000563149 SAGE2PA6NJ88 616 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 RNASET2O00584 256 aaKnown RBP12.63□□□□□ -0.39
USB1-207ENST00000563149 GRM6O15303 877 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 PARNO95453 639 aaKnown RBP12.63□□□□□ -0.39
USB1-207ENST00000563149 CXCL10P02778 98 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 CYP2A6P11509 494 aaPredicted RBP12.63□□□□□ -0.39
USB1-207ENST00000563149 CD22P20273 847 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 NCS1P62166 190 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 SELENOWP63302 87 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 IFITM3Q01628 133 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 CDC20Q12834 499 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 DOC2AQ14183 400 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 FBXO43Q4G163 708 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 AHSA2Q719I0 299 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 PAGE2Q7Z2X7 111 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 BBS7Q8IWZ6 715 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 DEPDC4Q8N2C3 294 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 CHTF18Q8WVB6 975 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 TPD52L3Q96J77 140 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 ZIC5Q96T25 663 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 COPS4Q9BT78 406 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 BHLHE41Q9C0J9 482 aaPredicted RBP12.63□□□□□ -0.39
USB1-207ENST00000563149 PCDH12Q9NPG4 1184 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 RASSF1Q9NS23 344 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 SIRT5Q9NXA8 310 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 B4GALT6Q9UBX8 382 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 AASSQ9UDR5 926 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 CLEC4EQ9ULY5 219 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 ERVK-11Q9UQG0 969 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 RNF6Q9Y252 685 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 POFUT2Q9Y2G5 429 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 UGT2A1Q9Y4X1 527 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 OBSL1O75147 1896 aa12.63□□□□□ -0.39
USB1-207ENST00000563149 GABRR3A8MPY1 467 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 TNFRSF11BO00300 401 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 CDK1P06493 297 aa12.62□□□□□ -0.39
USB1-207ENST00000563149 SRPRAP08240 638 aaKnown RBP12.62□□□□□ -0.39
USB1-207ENST00000563149 IDSP22304 550 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms