RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 OR1L3Q8NH93 324 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 USP7Q93009 1102 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 REPS1Q96D71 796 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 OR2A5Q96R48 311 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 ZNF382Q96SR6 550 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 TRMOQ9BU70 441 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 SARGQ9BW04 601 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 GATA5Q9BWX5 397 aaPredicted RBP18■□□□□ 0.47
RAB40C-207ENST00000563109 SLC7A5P2Q9GIP4 190 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 SPNS1Q9H2V7 528 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 NT5DC2Q9H857 520 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 ZBTB26Q9HCK0 441 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 APMAPQ9HDC9 416 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 PCDHGA4Q9Y5G9 962 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 SPTBN4Q9H254 2564 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 MDC1Q14676 2089 aaKnown RBP18■□□□□ 0.47
RAB40C-207ENST00000563109 KCNE1BA0A087WTH5 132 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 H3BQF6 201 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 ZSCAN9O15535 394 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-207ENST00000563109 HCRTR1O43613 425 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 NPHS1O60500 1241 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 PRAMEF4O60810 478 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 WFS1O76024 890 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 SLC35G6P0C7Q6 338 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 SERPINB1P30740 379 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 AHRP35869 848 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 SERPINB5P36952 375 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 PKNOX1P55347 436 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 TRAF3Q13114 568 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 CAMK2BQ13554 666 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 E2F2Q14209 437 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 GRM7Q14831 915 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 RTP5Q14D33 572 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 PRAMEF9Q5VWM5 478 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 TLDC1Q6P9B6 456 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 IGF2-ASQ6U949 168 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 ASPGQ86U10 573 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 L3MBTL4Q8NA19 623 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 CAMKVQ8NCB2 501 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 ZNF740Q8NDX6 193 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 CNDP1Q96KN2 507 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 CDK15Q96Q40 435 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 B3GNT4Q9C0J1 378 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 TRPS1Q9UHF7 1281 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 ANGPTL2Q9UKU9 493 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 PCDHGA3Q9Y5H0 932 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 AP1M2Q9Y6Q5 423 aa17.99■□□□□ 0.47
RAB40C-207ENST00000563109 LOC105369274A0A096LPK9 316 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 LOC102723532A0A0G2JNH3 316 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 TRABD2BA6NFA1 517 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 ANKDD1BA6NHY2 528 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 CRCPO75575 148 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 SCRG1O75711 98 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 SERPIND1P05546 499 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 PCNAP12004 261 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 CD22P20273 847 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 NR1D1P20393 614 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 PHEXP78562 749 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 RGS1Q08116 209 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 RCN2Q14257 317 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 CHI3L2Q15782 390 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 GGTA1PQ4G0N0 100 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 WASHC2DQ5SRD0 308 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 TTC19Q6DKK2 380 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-207ENST00000563109 ZCCHC23Q6ZST2 131 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 TRIM42Q8IWZ5 723 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.98■□□□□ 0.47
RAB40C-207ENST00000563109 OR4N4Q8N0Y3 316 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 TRPV3Q8NET8 790 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 OR4F6Q8NGB9 312 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 MOCOSQ96EN8 888 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 PRR11Q96HE9 360 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-207ENST00000563109 SEC16BQ96JE7 1060 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 ZNF285Q96NJ3 590 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 SLC46A1Q96NT5 459 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 NDC1Q9BTX1 674 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 EML4Q9HC35 981 aaKnown RBP17.98■□□□□ 0.47
RAB40C-207ENST00000563109 MID1IP1Q9NPA3 183 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 THSD1Q9NS62 852 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 ZFP69BQ9UJL9 534 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 SRPK3Q9UPE1 567 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 RNF11Q9Y3C5 154 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 PCDHGA11Q9Y5H2 935 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 B3GALT1Q9Y5Z6 326 aa17.98■□□□□ 0.47
RAB40C-207ENST00000563109 C9orf172C9J069 976 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 NVLO15381 856 aaKnown RBP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 NDUFS4O43181 175 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 LCMT2O60294 686 aaKnown RBP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 DXOO77932 396 aaKnown RBP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 SERPINE1P05121 402 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 ENO1P06733 434 aaKnown RBP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 HBQ1P09105 142 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 WDR4P57081 412 aaKnown RBP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 CYP4F2P78329 520 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 SHC2P98077 582 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 CPSF6Q16630 551 aaKnown RBP eCLIP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 YOD1Q5VVQ6 348 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 PWWP2BQ6NUJ5 590 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 AGAP11Q8TF27 550 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 DYDC1Q8WWB3 177 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms