RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 CEP70Q8NHQ1 597 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 TMEM74Q96NL1 305 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 OR52B2Q96RD2 323 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 MAP3K3Q99759 626 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 TUBB1Q9H4B7 451 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 TAC3Q9UHF0 121 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 SNX6Q9UNH7 406 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 SATB2Q9UPW6 733 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 BTRCQ9Y297 605 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 MSRB2Q9Y3D2 182 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 A0A1W2PPV9 198 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 GSAPA4D1B5 854 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 PRAMEF4O60810 478 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 DOC2AQ14183 400 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 C3orf38Q5JPI3 329 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 PRAMEF9Q5VWM5 478 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 METTL21CQ5VZV1 264 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 FAM219BQ5XKK7 198 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 GRHL2Q6ISB3 625 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 SLCO4C1Q6ZQN7 724 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 RNF165Q6ZSG1 346 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 TRPM8Q7Z2W7 1104 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 C17orf64Q86WR6 236 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 FAM20CQ8IXL6 584 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 ACTRT2Q8TDY3 377 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 PTCD3Q96EY7 689 aaKnown RBP21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 ANGPTL2Q9UKU9 493 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 TRIM33Q9UPN9 1127 aa21.55■■□□□ 1.04
SYNGR3-202ENST00000562045 KCNE1BA0A087WTH5 132 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 IGHV5-51A0A0C4DH38 117 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 FFAR3O14843 346 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 GPR42O15529 346 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 CCDC22O60826 627 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 ULK1O75385 1050 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 SEPHS1P49903 392 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 LSM12Q3MHD2 195 aaKnown RBP21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 TCHHL1Q5QJ38 904 aaPredicted RBP21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 ATG9BQ674R7 924 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 NXNQ6DKJ4 435 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 KLHL35Q6PF15 583 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 C6orf89Q6UWU4 347 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 MTDHQ86UE4 582 aaKnown RBP21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 TRIM73Q86UV7 250 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 WDR34Q96EX3 536 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 LIN37Q96GY3 246 aaPredicted RBP21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 PRR11Q96HE9 360 aaPredicted RBP21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 OR2A14Q96R47 310 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 DPYSL5Q9BPU6 564 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 EFCAB11Q9BUY7 163 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 ACAT2Q9BWD1 397 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 ACTR10Q9NZ32 417 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 POMT2Q9UKY4 750 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 PCDHB11Q9Y5F2 797 aa21.54■■□□□ 1.04
SYNGR3-202ENST00000562045 PCM1Q15154 2024 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 VPS4BO75351 444 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 SERPINA6P08185 405 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 LINC00032P0C843 101 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 CCL4P13236 92 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 ITIH1P19827 911 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 IFT88Q13099 833 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 ZRSR2Q15696 482 aaKnown RBP21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 XKR7Q5GH72 579 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 FOXR1Q6PIV2 292 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 ZDHHC12Q96GR4 267 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 KLHL25Q9H0H3 589 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 ELOVL6Q9H5J4 265 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 OCIAD1Q9NX40 245 aa21.53■■□□□ 1.04
SYNGR3-202ENST00000562045 PIPSLA2A3N6 862 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 TRABD2BA6NFA1 517 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 MANBAO00462 879 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 PRAMEF10O60809 474 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 RASSF9O75901 435 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 C1GALT1C1LP0DN25 315 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 PVRP15151 417 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 UGT2B7P16662 529 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 CD22P20273 847 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 PSMB5P28074 263 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 HTR6P50406 440 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 YBX1P67809 324 aaKnown RBP21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 PAGE2BQ5JRK9 111 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 CATSPEREQ5SY80 951 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 CACHD1Q5VU97 1274 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 ARMC6Q6NXE6 501 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 NXPE4Q6UWF7 544 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 USP7Q93009 1102 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 C3orf30Q96M34 536 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 TMEM121BQ9BXQ6 578 aaPredicted RBP21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 RIC8BQ9NVN3 520 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 SH2B3Q9UQQ2 575 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 LOXL2Q9Y4K0 774 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 PTGDR2Q9Y5Y4 395 aa21.52■■□□□ 1.04
SYNGR3-202ENST00000562045 ATP6AP2A0A1C7CYW4 349 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 CCT8L1PA6NM43 557 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 E9PBE3 544 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 H0YIV9 168 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 PRICKLE3O43900 615 aaPredicted RBP21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 KLHL41O60662 606 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 ATP6AP2O75787 350 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 VARSP26640 1264 aaKnown RBP21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 ETV5P41161 510 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms