RNA–Protein interactions for RNA: ENST00000561685.1

RRN3-204, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 5

Gene RRN3, Length 615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-204ENST00000561685 ERO1AQ96HE7 468 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 NKX3-1Q99801 234 aaPredicted RBP2.67□□□□□ -1.98
RRN3-204ENST00000561685 PANK2Q9BZ23 570 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 MTMR12Q9C0I1 747 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 THAP2Q9H0W7 228 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 SERINC1Q9NRX5 453 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 GKN1Q9NS71 199 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 FAM207AQ9NSI2 230 aaPredicted RBP2.67□□□□□ -1.98
RRN3-204ENST00000561685 B3GAT1Q9P2W7 334 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 SEC63Q9UGP8 760 aaKnown RBP2.67□□□□□ -1.98
RRN3-204ENST00000561685 PPP2R2CQ9Y2T4 447 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 CSNK1G3Q9Y6M4 447 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 XIRP2A4UGR9 3374 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 ZNF609O15014 1411 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 VPS8Q8N3P4 1428 aa2.67□□□□□ -1.98
RRN3-204ENST00000561685 KDM3BQ7LBC6 1761 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 NRXN2Q9P2S2 1712 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 A0A1W2PR80 420 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 PI4KAP2A4QPH2 592 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 ANKUB1A6NFN9 424 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 ACOD1A6NK06 481 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 ENO4A6NNW6 628 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 H0YAE9 185 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 OR2T7P0C7T2 308 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 CDC25CP30307 473 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 PSMB10P40306 273 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 PHLDA2Q53GA4 152 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 SLC35D3Q5M8T2 416 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 SPDYCQ5MJ68 293 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 FRRS1Q6ZNA5 592 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 SLC47A2Q86VL8 602 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.66□□□□□ -1.98
RRN3-204ENST00000561685 OR11H4Q8NGC9 324 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 SAT2Q96F10 170 aaPredicted RBP2.66□□□□□ -1.98
RRN3-204ENST00000561685 ZNF486Q96H40 463 aaPredicted RBP2.66□□□□□ -1.98
RRN3-204ENST00000561685 NECTIN4Q96NY8 510 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 PUS3Q9BZE2 481 aaKnown RBP2.66□□□□□ -1.98
RRN3-204ENST00000561685 FTOQ9C0B1 505 aaKnown RBP eCLIP2.66□□□□□ -1.98
RRN3-204ENST00000561685 SHARPINQ9H0F6 387 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 SMARCAD1Q9H4L7 1026 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 TRPV4Q9HBA0 871 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 EIF2B3Q9NR50 452 aaKnown RBP2.66□□□□□ -1.98
RRN3-204ENST00000561685 PSD3Q9NYI0 1048 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 GPR83Q9NYM4 423 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 C19orf25Q9UFG5 118 aaPredicted RBP2.66□□□□□ -1.98
RRN3-204ENST00000561685 PLAGL1Q9UM63 463 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 STUB1Q9UNE7 303 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 TNNQ9UQP3 1299 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 GCN1Q92616 2671 aaKnown RBP2.66□□□□□ -1.98
RRN3-204ENST00000561685 PCDH11YQ9BZA8 1340 aa2.66□□□□□ -1.98
RRN3-204ENST00000561685 AFDNP55196 1824 aaKnown RBP2.65□□□□□ -1.98
RRN3-204ENST00000561685 NAV2Q8IVL1 2488 aa2.65□□□□□ -1.98
RRN3-204ENST00000561685 BPTFQ12830 3046 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 PGPEP1LA6NFU8 196 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 USO1O60763 962 aaKnown RBP2.65□□□□□ -1.99
RRN3-204ENST00000561685 IGHEP01854 428 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 THEGLP0DJG4 465 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 GJA1P17302 382 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 GARSP41250 739 aaKnown RBP2.65□□□□□ -1.99
RRN3-204ENST00000561685 SLC15A1P46059 708 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 LMOD3Q0VAK6 560 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 ITPK1Q13572 414 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 HERC3Q15034 1050 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 C15orf32Q32M92 178 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 XKR3Q5GH77 459 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 KRT79Q5XKE5 535 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 CATSPERDQ86XM0 798 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 CEP57Q86XR8 500 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 HPS6Q86YV9 775 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 METTL4Q8N3J2 472 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 AQP11Q8NBQ7 271 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 EXD1Q8NHP7 514 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 ZNF622Q969S3 477 aaKnown RBP eCLIP2.65□□□□□ -1.992e-6■■■■■ 29.6
RRN3-204ENST00000561685 LGMNQ99538 433 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 MMP27Q9H306 513 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 SEPT11Q9NVA2 429 aaKnown RBP2.65□□□□□ -1.99
RRN3-204ENST00000561685 ARHGEF38Q9NXL2 777 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 WIPI2Q9Y4P8 454 aa2.65□□□□□ -1.99
RRN3-204ENST00000561685 USP42Q9H9J4 1324 aaKnown RBP2.65□□□□□ -1.99
RRN3-204ENST00000561685 FAM208BQ5VWN6 2430 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 ARFGEF2Q9Y6D5 1785 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 NUP155O75694 1391 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 FAM208AQ9UK61 1670 aaKnown RBP2.64□□□□□ -1.99
RRN3-204ENST00000561685 B4DLN1 442 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 O00370 1275 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 TFECO14948 347 aaPredicted RBP2.64□□□□□ -1.99
RRN3-204ENST00000561685 PAPSS1O43252 624 aaPredicted RBP2.64□□□□□ -1.99
RRN3-204ENST00000561685 CEACAM4O75871 244 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 MBD4O95243 580 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 CD4P01730 458 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 GABRA5P31644 462 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 CSTF2P33240 577 aaKnown RBP eCLIP2.64□□□□□ -1.99
RRN3-204ENST00000561685 MRPL12P52815 198 aaKnown RBP2.64□□□□□ -1.99
RRN3-204ENST00000561685 KRTAP10-8P60410 259 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 ARF3P61204 181 aaPredicted RBP2.64□□□□□ -1.99
RRN3-204ENST00000561685 CSNK2BP67870 215 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 ARF1P84077 181 aaKnown RBP2.64□□□□□ -1.99
RRN3-204ENST00000561685 TAF10Q12962 218 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 ZNF74Q16587 644 aa2.64□□□□□ -1.99
RRN3-204ENST00000561685 SEL1L3Q68CR1 1132 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms