RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CTAGE15A4D2H0 777 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 H7BY64 318 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CTAGE8P0CG41 777 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 RNF224P0DH78 156 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 GRK3P35626 688 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 POU4F1Q01851 419 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 MRPL49Q13405 166 aaKnown RBP15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CTAGE6Q86UF2 777 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CUZD1Q86UP6 607 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CCDC25Q86WR0 208 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CTAGE4Q8IX94 777 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 PARP9Q8IXQ6 854 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 TBC1D19Q8N5T2 526 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 MIEF2Q96C03 454 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 MVB12AQ96EY5 273 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 PRAP1Q96NZ9 151 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CPNE1Q99829 537 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 RHOJQ9H4E5 214 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 POPDC3Q9HBV1 291 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 C3orf18Q9UK00 162 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CDC14AQ9UNH5 594 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 B3GNT3Q9Y2A9 372 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 NTNG1Q9Y2I2 539 aa15.17■□□□□ 0.02
LMX1B-204ENST00000561065 CNTRLQ7Z7A1 2325 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 A0A0A6YYC8 382 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-204ENST00000561065 TCP11X1B4DZS4 312 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 I3L1I5 382 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-204ENST00000561065 KLHL41O60662 606 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 VPS4BO75351 444 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 ALPPP05187 535 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 COX6A1P12074 109 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 SAT1P21673 171 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 FDXRP22570 491 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 STX2P32856 288 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 PHBP35232 272 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 SPRP35270 261 aaPredicted RBP15.16■□□□□ 0.02
LMX1B-204ENST00000561065 SLC26A3P40879 764 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 MAGEA4P43358 317 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 CSNK1G2P78368 415 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 MAT1AQ00266 395 aaKnown RBP15.16■□□□□ 0.02
LMX1B-204ENST00000561065 CRB2Q5IJ48 1285 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 AGTRAPQ6RW13 159 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 Q6ZS92 163 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 PRSS41Q7RTY9 318 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 ZC3H7AQ8IWR0 971 aaKnown RBP15.16■□□□□ 0.02
LMX1B-204ENST00000561065 CEP112Q8N8E3 955 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 SNRNP40Q96DI7 357 aaKnown RBP15.16■□□□□ 0.02
LMX1B-204ENST00000561065 MACROD1Q9BQ69 325 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 HAUS8Q9BT25 410 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 DRC3Q9H069 523 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 ATG10Q9H0Y0 220 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 ARL15Q9NXU5 204 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 TRPC4Q9UBN4 977 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 VPS4AQ9UN37 437 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 PCDHGA10Q9Y5H3 936 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 PSAT1Q9Y617 370 aa15.16■□□□□ 0.02
LMX1B-204ENST00000561065 ICE1Q9Y2F5 2266 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 SPTBN1Q01082 2364 aaKnown RBP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 IDSB3KWA1 339 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 PRPF4O43172 522 aaKnown RBP eCLIP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 ACPPP15309 386 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 MRPS25P82663 173 aaKnown RBP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 OCA2Q04671 838 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 EEF1A2Q05639 463 aaKnown RBP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 NAB1Q13506 487 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 GRTP1Q5TC63 336 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 GARNL3Q5VVW2 1013 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 ATG9BQ674R7 924 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 CAPN13Q6MZZ7 669 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 IGFL2Q6UWQ7 119 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 ZC3HC1Q86WB0 502 aaKnown RBP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 CTAGE3PQ8IX95 158 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 MMGT1Q8N4V1 131 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 FBXO25Q8TCJ0 367 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 MMABQ96EY8 250 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 SGPP1Q9BX95 441 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 ZNF160Q9HCG1 818 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 TMEM184CQ9NVA4 438 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 ASF1BQ9NVP2 202 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 GRHL1Q9NZI5 618 aa15.15■□□□□ 0.02
LMX1B-204ENST00000561065 NOVA2Q9UNW9 492 aaKnown RBP15.15■□□□□ 0.02
LMX1B-204ENST00000561065 NAV2Q8IVL1 2488 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 FAM95CA0A1B0GW59 222 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 A0A1W2PQ72 361 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 FEZF1A0PJY2 475 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 MAP2K7O14733 419 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 IPO13O94829 963 aaKnown RBP15.14■□□□□ 0.01
LMX1B-204ENST00000561065 HPP00738 406 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 CELA2AP08217 269 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 CDH1P12830 882 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 SSTR1P30872 391 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 GP5P40197 560 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 BCL6P41182 706 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 NAE1Q13564 534 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 TMEM207Q6UWW9 146 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 C17orf64Q86WR6 236 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 IQCKQ8N0W5 287 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 CISD2Q8N5K1 135 aaKnown RBP15.14■□□□□ 0.01
LMX1B-204ENST00000561065 OR9A4Q8NGU2 314 aa15.14■□□□□ 0.01
LMX1B-204ENST00000561065 THAP11Q96EK4 314 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms