RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RBM12BQ8IXT5 1001 aaKnown RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 SLC15A3Q8IY34 581 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 ZNF740Q8NDX6 193 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 OR2L3Q8NG85 312 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 ASB9Q96DX5 294 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 SLC45A3Q96JT2 553 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 PRAP1Q96NZ9 151 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 OR52E6Q96RD3 313 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 NRTNQ99748 197 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 SARGQ9BW04 601 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 SRMSQ9H3Y6 488 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 IL1RL2Q9HB29 575 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 PRM3Q9NNZ6 103 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 KLF15Q9UIH9 416 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 SNX7Q9UNH6 387 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 MAN2B2Q9Y2E5 1009 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 WBP11Q9Y2W2 641 aaKnown RBP16.44■□□□□ 0.22
HDDC3-206ENST00000561036 L3MBTL1Q9Y468 752 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 PCDHA9Q9Y5H5 950 aa16.44■□□□□ 0.22
HDDC3-206ENST00000561036 PCM1Q15154 2024 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 CCDC163A0A0D9SF12 145 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 PRORSD1PA6NEY8 169 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 NME4O00746 187 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 ACOT8O14734 319 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 ERN1O75460 977 aaKnown RBP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 CLEC3AO75596 197 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 KRT36O76013 467 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 SORBS2O94875 1100 aaKnown RBP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 FKBP9O95302 570 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 TGFB1P01137 390 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 GRK3P35626 688 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 PXNP49023 591 aaPredicted RBP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 EEFSECP57772 596 aaKnown RBP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 UBE2IP63279 158 aaKnown RBP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 FLOT2Q14254 428 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 SF1Q15637 639 aaKnown RBP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 CCDC6Q16204 474 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 DEPDC1Q5TB30 811 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 TAF8Q7Z7C8 310 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 AVL9Q8NBF6 648 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 CLHC1Q8NHS4 586 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 GTF2H4Q92759 462 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 TMEM125Q96AQ2 219 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 ITCHQ96J02 903 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 SLC39A3Q9BRY0 314 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 MS4A8Q9BY19 250 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 MUC13Q9H3R2 512 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 CMTM6Q9NX76 183 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 STX18Q9P2W9 335 aaKnown RBP16.43■□□□□ 0.22
HDDC3-206ENST00000561036 MCM8Q9UJA3 840 aa16.43■□□□□ 0.22
HDDC3-206ENST00000561036 PRAMEF33A0A0G2JMD5 474 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 TLR4O00206 839 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 MAP3K7O43318 606 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 PCDH7O60245 1069 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 STAMBPO95630 424 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 VIPP01282 170 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 CSF2P04141 144 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 NME1P15531 152 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 JUNDP17535 347 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 PEBP1P30086 187 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 GCKP35557 465 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 HPCAL1P37235 193 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 RPL3P39023 403 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 KIR3DL1P43629 444 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 YBX1P67809 324 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 ZNF763Q0D2J5 394 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 LRRC74AQ0VAA2 488 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 BNIP2Q12982 314 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 CAPRIN1Q14444 709 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 RCN1Q15293 331 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 PRRT3Q5FWE3 981 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 KHDRBS2Q5VWX1 349 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 NANOGP8Q6NSW7 305 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 ARMCX6Q7L4S7 300 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 COMMD6Q7Z4G1 85 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 CAMKMTQ7Z624 323 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 SLC9B2Q86UD5 537 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 ADGRF3Q8IZF5 1079 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 GPR156Q8NFN8 814 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 OR4E2Q8NGC2 313 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 OR8J3Q8NGG0 315 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 OR8J2Q8NGG1 315 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 QRFPRQ96P65 431 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 PRPF18Q99633 342 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 CGREF1Q99674 301 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 SH3GL1Q99961 368 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 CENPKQ9BS16 269 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 EBPLQ9BY08 206 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 KCNH6Q9H252 994 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 OR51B5Q9H339 312 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 TCEAL2Q9H3H9 227 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 NANOGQ9H9S0 305 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 FAM120CQ9NX05 1096 aaKnown RBP16.42■□□□□ 0.22
HDDC3-206ENST00000561036 CPNE7Q9UBL6 633 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 MUTYHQ9UIF7 546 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 ANGPTL2Q9UKU9 493 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 PCDHGA2Q9Y5H1 932 aa16.42■□□□□ 0.22
HDDC3-206ENST00000561036 A0A096LPI6 279 aa16.41■□□□□ 0.22
HDDC3-206ENST00000561036 IGKV1-8A0A0C4DH67 115 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms