RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 BCORP1Q8N888 145 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 IMMP1LQ96LU5 166 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 MACROD1Q9BQ69 325 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 SLX1AQ9BQ83 275 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 ATG10Q9H0Y0 220 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 SNX12Q9UMY4 172 aa15.36■□□□□ 0.05
SNX1-213ENST00000561026 CELSR2Q9HCU4 2923 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 TRAV17A0A0B4J275 112 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 CES2O00748 559 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 SLC16A5O15375 505 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 JRKO75564 520 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 AHSGP02765 367 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 C8orf89P0DMQ9 161 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 COL8A1P27658 744 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 CDKN2DP55273 166 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 AP2B1P63010 937 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 DHX9Q08211 1270 aaKnown RBP15.35■□□□□ 0.05
SNX1-213ENST00000561026 NAE1Q13564 534 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 MSS51Q4VC12 460 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 SPANXN3Q5MJ09 141 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 TMEM214Q6NUQ4 689 aaKnown RBP15.35■□□□□ 0.05
SNX1-213ENST00000561026 AGTRAPQ6RW13 159 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 MBOAT1Q6ZNC8 495 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 KIAA0408Q6ZU52 694 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 PRSS41Q7RTY9 318 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 PCGF5Q86SE9 256 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 C17orf64Q86WR6 236 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 CNTN4Q8IWV2 1026 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 METTL21AQ8WXB1 218 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 TM4SF19Q96DZ7 209 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 CYTH2Q99418 400 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 NAT9Q9BTE0 207 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 TUBB6Q9BUF5 446 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 SGPP1Q9BX95 441 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 VN1R1Q9GZP7 353 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 OLAHQ9NV23 265 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 ASIC3Q9UHC3 531 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 SH2B3Q9UQQ2 575 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 OSGIN2Q9Y236 505 aa15.35■□□□□ 0.05
SNX1-213ENST00000561026 DNALI1O14645 258 aaPredicted RBP15.34■□□□□ 0.05
SNX1-213ENST00000561026 LRRTM2O43300 516 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 BANF1O75531 89 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 CYC1P08574 325 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 HIST1H2AGP0C0S8 130 aaPredicted RBP15.34■□□□□ 0.05
SNX1-213ENST00000561026 ITGAMP11215 1152 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 NPPBP16860 134 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 HIST1H2ADP20671 130 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 CCND1P24385 295 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 BCL6P41182 706 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 PHKG1Q16816 387 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 RBM20Q5T481 1227 aaKnown RBP15.34■□□□□ 0.05
SNX1-213ENST00000561026 ZNF324BQ6AW86 544 aaPredicted RBP15.34■□□□□ 0.05
SNX1-213ENST00000561026 IGDCC3Q8IVU1 814 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 SHISA5Q8N114 240 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 MYO1HQ8N1T3 1032 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 AMER2Q8N7J2 671 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 CAMKVQ8NCB2 501 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 OR51Q1Q8NH59 317 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 SLCO2A1Q92959 643 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 LINGO1Q96FE5 620 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 HIST1H2AHQ96KK5 128 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 TAAR6Q96RI8 345 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 HIST1H2AJQ99878 128 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 H2AFJQ9BTM1 129 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 FAM129AQ9BZQ8 928 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 RNF32Q9H0A6 362 aa15.34■□□□□ 0.05
SNX1-213ENST00000561026 DDX47Q9H0S4 455 aaKnown RBP15.34■□□□□ 0.05
SNX1-213ENST00000561026 DIDO1Q9BTC0 2240 aaKnown RBP15.34■□□□□ 0.05
SNX1-213ENST00000561026 FEZF1A0PJY2 475 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 LCMT2O60294 686 aaKnown RBP15.33■□□□□ 0.04
SNX1-213ENST00000561026 TSPAN12O95859 305 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 WDPCPO95876 746 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 F10P00742 488 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 UQCRHP07919 91 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 IL1RNP18510 177 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 IVDP26440 423 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 DCTP40126 519 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 XCR1P46094 333 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 INAQ16352 499 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 ZXDCQ2QGD7 858 aaPredicted RBP15.33■□□□□ 0.04
SNX1-213ENST00000561026 MINDY4Q4G0A6 757 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 CAPN13Q6MZZ7 669 aaPredicted RBP15.33■□□□□ 0.04
SNX1-213ENST00000561026 LCTLQ6UWM7 567 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 GALNT7Q86SF2 657 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 ASPGQ86U10 573 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 ZGRF1Q86YA3 2104 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 KCT2Q8NC54 265 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 SLC13A3Q8WWT9 602 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 ALKBH8Q96BT7 664 aaKnown RBP15.33■□□□□ 0.04
SNX1-213ENST00000561026 CERS2Q96G23 380 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 MAGEB10Q96LZ2 347 aaPredicted RBP15.33■□□□□ 0.04
SNX1-213ENST00000561026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.33■□□□□ 0.04
SNX1-213ENST00000561026 PLAC1Q9HBJ0 212 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 ANKHQ9HCJ1 492 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 STMN3Q9NZ72 180 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 HCN3Q9P1Z3 774 aa15.33■□□□□ 0.04
SNX1-213ENST00000561026 SGK494L7N484 410 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 ZSCAN12O43309 604 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 STSP08842 583 aa15.32■□□□□ 0.04
SNX1-213ENST00000561026 CDH1P12830 882 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms