RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 KLK4Q9Y5K2 254 aa9.91□□□□□ -0.82
CDC42BPB-207ENST00000560492 SOWAHDA6NJG2 315 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 FAM90A27PA6NNH2 459 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 HAT1O14929 419 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 PFDN6O15212 129 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 P2RX6O15547 441 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 FOXS1O43638 330 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CDC40O60508 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 NIPSNAP2O75323 286 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CDC123O75794 336 aaPredicted RBP9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 TPOP07202 933 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 IL1RNP18510 177 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 PSMA3P25788 255 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CD96P40200 585 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 XCR1P46094 333 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 AGTR2P50052 363 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 PNLIPRP1P54315 467 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CRADDP78560 199 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 TESK1Q15569 626 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 EXT1Q16394 746 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 PAPD4Q6PIY7 484 aaKnown RBP9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 Q6ZPB1 254 aaPredicted RBP9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CEP128Q6ZU80 1094 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 SDCCAG8Q86SQ7 713 aaPredicted RBP9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 KIAA1328Q86T90 577 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 LRRC6Q86X45 466 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CCDC170Q8IYT3 715 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CCDC89Q8N998 374 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 OR51Q1Q8NH59 317 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 ATG4AQ8WYN0 398 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CALR3Q96L12 384 aaKnown RBP9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 FRMD6Q96NE9 622 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 CHRAC1Q9NRG0 131 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 LRFN1Q9P244 771 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 RIMKLBQ9ULI2 386 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 PACSIN2Q9UNF0 486 aaPredicted RBP9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF148Q9UQR1 794 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF835Q9Y2P0 537 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 PCDHGB6Q9Y5F9 930 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 HCFC1P51610 2035 aa9.9□□□□□ -0.82
CDC42BPB-207ENST00000560492 INTS1Q8N201 2190 aaKnown RBP9.9□□□□□ -0.83
CDC42BPB-207ENST00000560492 OR2W5A6NFC9 320 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 ARHGEF33A8MVX0 844 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 E9PLN8 166 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 NDC80O14777 642 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 TFECO14948 347 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 SP1P08047 785 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 EFNA3P52797 238 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 ACVR1Q04771 509 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 PRDX1Q06830 199 aaKnown RBP9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 MYBPHQ13203 477 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 SNX1Q13596 522 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 FAM53BQ14153 422 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 KLHL38Q2WGJ6 581 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 SFT2D3Q587I9 215 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 PCID2Q5JVF3 399 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 SLC25A25Q6KCM7 469 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 MRNIPQ6NTE8 343 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 PRSS41Q7RTY9 318 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 ANKRD37Q7Z713 158 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 CD163Q86VB7 1156 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 DOLPP1Q86YN1 238 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 MDS2Q8NDY4 140 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 TMEM125Q96AQ2 219 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 OR2A5Q96R48 311 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 PKP4Q99569 1192 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 LPAR4Q99677 370 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 EBNA1BP2Q99848 306 aaKnown RBP9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 VKORC1Q9BQB6 163 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 ZNF559Q9BR84 538 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 P2RY12Q9H244 342 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 CDCP1Q9H5V8 836 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 SYNPO2LQ9H987 977 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 ANKHQ9HCJ1 492 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 CRYL1Q9Y2S2 319 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 DUSP10Q9Y6W6 482 aa9.89□□□□□ -0.83
CDC42BPB-207ENST00000560492 IGKV1-8A0A0C4DH67 115 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 TCRBV7S2A1N4TA0A589 114 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 GRID2IPA4D2P6 1211 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 NKX2-6A6NCS4 301 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 USP27XA6NNY8 438 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 FOXO6A8MYZ6 492 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 GOLGA8KD6RF30 607 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 H0YIG0 161 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 H3BMM5 538 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 GOLGA8TH3BQL2 631 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 H7BY64 318 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 SGK494L7N484 410 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 MAN1A2O60476 641 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 RDH16O75452 317 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 SLC25A12O75746 678 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 SLC16A8O95907 504 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 FTCDO95954 541 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 ETS1P14921 441 aa9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 RPS3P23396 243 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 DEKP35659 375 aaKnown RBP9.88□□□□□ -0.83
CDC42BPB-207ENST00000560492 HSD17B2P37059 387 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms