RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 HYKKA2RU49 373 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 FOXO6A8MYZ6 492 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 C21orf140B9A014 251 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 GOLGA8RI6L899 631 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 K7EPI3 171 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 DSCR3O14972 297 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 EIF2S1P05198 315 aaKnown RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 GFAPP14136 432 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 VARSP26640 1264 aaKnown RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 DLSTP36957 453 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 SCTRP47872 440 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 MEF2AQ02078 507 aaPredicted RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 PCDH1Q08174 1060 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 DNASE1L3Q13609 305 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 COL9A2Q14055 689 aaPredicted RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 E2F2Q14209 437 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 PCBP2Q15366 365 aaKnown RBP eCLIP16.05■□□□□ 0.16
RPL28-209ENST00000560055 PDK4Q16654 411 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 PFKFB4Q16877 469 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 FAM214AQ32MH5 1076 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 ATG9BQ674R7 924 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 METTL2BQ6P1Q9 378 aaKnown RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 TTLL10Q6ZVT0 673 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 MFSD9Q8NBP5 474 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 MR1Q95460 341 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 KIAA1143Q96AT1 154 aaPredicted RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 WDR34Q96EX3 536 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 EFHD1Q9BUP0 239 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 TMEM109Q9BVC6 243 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 ROPN1BQ9BZX4 212 aaPredicted RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 FAM117AQ9C073 453 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 ROPN1Q9HAT0 212 aaPredicted RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 CPNE5Q9HCH3 593 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 TXLNGQ9NUQ3 528 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 GEMIN8Q9NWZ8 242 aaKnown RBP16.05■□□□□ 0.16
RPL28-209ENST00000560055 TMEM216Q9P0N5 145 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 IL17BQ9UHF5 180 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 LGALS13Q9UHV8 139 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 TMCO1Q9UM00 188 aa16.05■□□□□ 0.16
RPL28-209ENST00000560055 TXNDC9O14530 226 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 CCNT2O60583 730 aaKnown RBP16.04■□□□□ 0.16
RPL28-209ENST00000560055 GSTA1P08263 222 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 C1GALT1C1LP0DN25 315 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 TCN2P20062 427 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 DCDP81605 110 aaKnown RBP16.04■□□□□ 0.16
RPL28-209ENST00000560055 VAC14Q08AM6 782 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 MUM1Q2TAK8 710 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 C1orf189Q5VU69 101 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 GARNL3Q5VVW2 1013 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 CCDC81Q6ZN84 652 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 SCYL1Q96KG9 808 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 RUFY1Q96T51 708 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 AIF1LQ9BQI0 150 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 GPR87Q9BY21 358 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 SLC22A11Q9NSA0 550 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 WDR70Q9NW82 654 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 CPSF2Q9P2I0 782 aaKnown RBP16.04■□□□□ 0.16
RPL28-209ENST00000560055 OPTCQ9UBM4 332 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 KCND3Q9UK17 655 aa16.04■□□□□ 0.16
RPL28-209ENST00000560055 LRRC14BA6NHZ5 514 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 STX16-NPEPL1H3BU86 382 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 STX16O14662 325 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 OR1F1O43749 312 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 RAB40ALP0C0E4 278 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 KRT15P19012 456 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 CD22P20273 847 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 AGXTP21549 392 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 AHRP35869 848 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 SNRPNP63162 240 aaKnown RBP16.03■□□□□ 0.16
RPL28-209ENST00000560055 IFFO1Q0D2I5 559 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 FAM53BQ14153 422 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 TBCCQ15814 346 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 NKAIN1Q4KMZ8 207 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 ASPGQ86U10 573 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 DTWD1Q8N5C7 304 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 PTGR2Q8N8N7 351 aaPredicted RBP16.03■□□□□ 0.16
RPL28-209ENST00000560055 SNX31Q8N9S9 440 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 ANKRD53Q8N9V6 530 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 CAMKVQ8NCB2 501 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 MVB12AQ96EY5 273 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 NLNQ9BYT8 704 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 ZFP69BQ9UJL9 534 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 PLAAQ9Y263 795 aa16.03■□□□□ 0.16
RPL28-209ENST00000560055 TNPO3Q9Y5L0 923 aaKnown RBP16.03■□□□□ 0.16
RPL28-209ENST00000560055 MRPS18BQ9Y676 258 aaKnown RBP16.03■□□□□ 0.16
RPL28-209ENST00000560055 TLDC2A0PJX2 215 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 CCDC151A5D8V7 595 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 E2F3O00716 465 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 SMIM24O75264 130 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 WFS1O76024 890 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 SIX3O95343 332 aaPredicted RBP16.02■□□□□ 0.16
RPL28-209ENST00000560055 STATHP02808 62 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 ALAS2P22557 587 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 CXCR2P25025 360 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 PTPN4P29074 926 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 CASP2P42575 452 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 CXADRP78310 365 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 NFKB2Q00653 900 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 SLC18A2Q05940 514 aa16.02■□□□□ 0.16
RPL28-209ENST00000560055 PWP1Q13610 501 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms