RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 GPR89AB7ZAQ6 455 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 TXNDC9O14530 226 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 AKAP10O43572 662 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 GMNNO75496 209 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 GPR89BP0CG08 455 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 PRPS1L1P21108 318 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 MTPNP58546 118 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 NFE2L1Q14494 772 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 LPAL2Q16609 132 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 PLA2G4EQ3MJ16 856 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 MED27Q6P2C8 311 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 SLCO4C1Q6ZQN7 724 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 C11orf96Q7Z7L8 435 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 ADGRG5Q8IZF4 528 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 DNASE2BQ8WZ79 361 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 WDR34Q96EX3 536 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 SLC6A18Q96N87 628 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 TSSK3Q96PN8 268 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 EFCAB11Q9BUY7 163 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 SGPP1Q9BX95 441 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 AASDHPPTQ9NRN7 309 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 VAPAQ9P0L0 249 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 ANAPC2Q9UJX6 822 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 MAPRE3Q9UPY8 281 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 TMEM98Q9Y2Y6 226 aa17.14■□□□□ 0.33
SNX1-208ENST00000559844 A0A096LPI6 279 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 TCRBV5S2A0A599 114 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 DFNA5O60443 496 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 TIPRLO75663 272 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 BMP2P12643 396 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 CYP51A1Q16850 503 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 MTX3Q5HYI7 312 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 PAGE2BQ5JRK9 111 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 GCNT7Q6ZNI0 430 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 PDZD3Q86UT5 571 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 NUDT8Q8WV74 236 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 RAD51AP1Q96B01 352 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 NSMCE2Q96MF7 247 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 ZDHHC5Q9C0B5 715 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 OR52A5Q9H2C5 316 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 SEMA6AQ9H2E6 1030 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 EHD1Q9H4M9 534 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 CIDEBQ9UHD4 219 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 NEUROG3Q9Y4Z2 214 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 OR1A2Q9Y585 309 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 KNL1Q8NG31 2342 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 SMNDC1O75940 238 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNX1-208ENST00000559844 RPN2P04844 631 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 LYNP07948 512 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 MTHFD1P11586 935 aaKnown RBP17.13■□□□□ 0.33
SNX1-208ENST00000559844 KELP23276 732 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 FASP25445 335 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 CYP4F3Q08477 520 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 ACSM2AQ08AH3 577 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 SELPLGQ14242 412 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 RUNDC3AQ59EK9 446 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 LRIF1Q5T3J3 769 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 ATG9BQ674R7 924 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 ACSM2BQ68CK6 577 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 GLYATQ6IB77 296 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 HMBOX1Q6NT76 420 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 DOK6Q6PKX4 331 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 SYT12Q8IV01 421 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 APLFQ8IW19 511 aaPredicted RBP17.13■□□□□ 0.33
SNX1-208ENST00000559844 RIMKLAQ8IXN7 391 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 TMEM132CQ8N3T6 1108 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 OXR1Q8N573 874 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 TRPV3Q8NET8 790 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 SETD7Q8WTS6 366 aaKnown RBP17.13■□□□□ 0.33
SNX1-208ENST00000559844 NEIL2Q969S2 332 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 CCDC115Q96NT0 180 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 TEX101Q9BY14 249 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 WDR26Q9H7D7 661 aa17.13■□□□□ 0.33
SNX1-208ENST00000559844 PCNAP12004 261 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 TACR1P25103 407 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 OR4D2P58180 307 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 PLIN5Q00G26 463 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 SRSF11Q05519 484 aaKnown RBP17.12■□□□□ 0.33
SNX1-208ENST00000559844 LAPTM5Q13571 262 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 DDX39BQ13838 428 aaKnown RBP17.12■□□□□ 0.33
SNX1-208ENST00000559844 HIST2H2ACQ16777 129 aaPredicted RBP17.12■□□□□ 0.33
SNX1-208ENST00000559844 HIST2H2AA3Q6FI13 130 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 TMPRSS11BQ86T26 416 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 GPR180Q86V85 440 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 MARVELD2Q8N4S9 558 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 PAPD5Q8NDF8 572 aaKnown RBP17.12■□□□□ 0.33
SNX1-208ENST00000559844 OR7G3Q8NG95 312 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 BMFQ96LC9 184 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 MTERF1Q99551 399 aaKnown RBP17.12■□□□□ 0.33
SNX1-208ENST00000559844 THUMPD3Q9BV44 507 aaKnown RBP17.12■□□□□ 0.33
SNX1-208ENST00000559844 CCDC177Q9NQR7 707 aaPredicted RBP17.12■□□□□ 0.33
SNX1-208ENST00000559844 ASF1AQ9Y294 204 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 HS3ST3A1Q9Y663 406 aa17.12■□□□□ 0.33
SNX1-208ENST00000559844 A6NHS1 94 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 KMOO15229 486 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 UBTFL6P0CB48 400 aaPredicted RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 C1GALT1C1LP0DN25 315 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 NCK1P16333 377 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 NPPBP16860 134 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 ZNF26P17031 533 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms