RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RIT1Q92963 219 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 MRPL38Q96DV4 380 aaKnown RBP3.37□□□□□ -1.87
SPG11-218ENST00000559754 ART5Q96L15 291 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 TXN2Q99757 166 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 OLFM1Q99784 485 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 CPNE1Q99829 537 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 OPRPNQ99935 248 aaPredicted RBP3.37□□□□□ -1.87
SPG11-218ENST00000559754 ANP32EQ9BTT0 268 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 DPH5Q9H2P9 285 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ZDHHC18Q9NUE0 388 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 DPP3Q9NY33 737 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 TBC1D7Q9P0N9 293 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 SPASTQ9UBP0 616 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 MTUS1Q9ULD2 1270 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ITM2BQ9Y287 266 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 SYNRGQ9UMZ2 1314 aa3.37□□□□□ -1.87
SPG11-218ENST00000559754 ANKUB1A6NFN9 424 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 CACNB4O00305 520 aaPredicted RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 ANGPT2O15123 496 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SSX4O60224 188 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 FCGR3BO75015 233 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 PRDM1O75626 825 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 RAD51DO75771 328 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 KCNK5O95279 499 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 CD48P09326 243 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SPP1P10451 314 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 AREGP15514 252 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 ZNF26P17031 533 aaPredicted RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 CYP11B2P19099 503 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SLC6A6P31641 620 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 GABRA5P31644 462 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SFNP31947 248 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 MAGEA4P43358 317 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 PSMC4P43686 418 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 GMPSP49915 693 aaPredicted RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 SERPINH1P50454 418 aaKnown RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 PRKCEQ02156 737 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 GAGE2BQ13066 116 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 MEP1AQ16819 746 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 ZFP69Q49AA0 526 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 GAGE2EQ4V326 116 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 LRRC73Q5JTD7 316 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 ZDHHC20Q5W0Z9 365 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 CES4AQ5XG92 561 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 FAM109BQ6ICB4 259 aaPredicted RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 PRR27Q6MZM9 219 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 GAGE2AQ6NT46 116 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 FIGLAQ6QHK4 219 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SH2D5Q6ZV89 423 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 PRSS42Q7Z5A4 293 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 RASGEF1CQ8N431 466 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 AMER3Q8N944 861 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 EXOC6Q8TAG9 804 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 TBC1D16Q8TBP0 767 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SMPDL3BQ92485 455 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 ANKRD9Q96BM1 317 aaPredicted RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 SPDL1Q96EA4 605 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 OTUB1Q96FW1 271 aaPredicted RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 LINC00479Q96M42 142 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 OR6C1Q96RD1 312 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SLC22A12Q96S37 553 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 SLX1AQ9BQ83 275 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 PSD2Q9BQI7 771 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 GTPBP2Q9BX10 602 aaKnown RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 S1PR5Q9H228 398 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 P2RY12Q9H244 342 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 RWDD1Q9H446 243 aaPredicted RBP3.36□□□□□ -1.87
SPG11-218ENST00000559754 FGF22Q9HCT0 170 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 AATFQ9NY61 560 aaKnown RBP eCLIP3.36□□□□□ -1.87
SPG11-218ENST00000559754 GAGE2DQ9UEU5 116 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 TSPAN16Q9UKR8 245 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 HPCAL4Q9UM19 191 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 KCNJ14Q9UNX9 436 aa3.36□□□□□ -1.87
SPG11-218ENST00000559754 A0A0A6YYC8 382 aaPredicted RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 C2orf92A0A1B0GVN3 265 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 C5orf51A6NDU8 294 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 HEPACAM2A8MVW5 462 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 KBTBD13C9JR72 458 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SLCO1B7G3V0H7 640 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 I3L1I5 382 aaPredicted RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 PLPP2O43688 288 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SSX5O60225 188 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 WISP2O76076 250 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 GLCEO94923 617 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SNX4O95219 450 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 LUC7L3O95232 432 aaKnown RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 MT-ATP6P00846 226 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 PDGFBP01127 241 aaPredicted RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 C9P02748 559 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 OR2T7P0C7T2 308 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 LIFP15018 202 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 ACP1P24666 158 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 ITGA3P26006 1051 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 SERPINB6P35237 376 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 MAP2K2P36507 400 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 MDH1P40925 334 aaKnown RBP3.35□□□□□ -1.87
SPG11-218ENST00000559754 IFNAR2P48551 515 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 RGS7P49802 495 aa3.35□□□□□ -1.87
SPG11-218ENST00000559754 HNMTP50135 292 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms