RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CAPN13Q6MZZ7 669 aaPredicted RBP15.89■□□□□ 0.13
TPM1-219ENST00000559397 KLHL35Q6PF15 583 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 DEFB124Q8NES8 71 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 MED8Q96G25 268 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 RAB33BQ9H082 229 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 LRRN3Q9H3W5 708 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 CCDC177Q9NQR7 707 aaPredicted RBP15.89■□□□□ 0.13
TPM1-219ENST00000559397 AIG1Q9NVV5 245 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 TOR4AQ9NXH8 423 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 ACTR10Q9NZ32 417 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 GPRC5BQ9NZH0 403 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 SERTM1A2A2V5 107 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 PIPSLA2A3N6 862 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 SLC28A1O00337 649 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 FFAR3O14843 346 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 LSM1O15116 133 aaKnown RBP15.89■□□□□ 0.13
TPM1-219ENST00000559397 GPR42O15529 346 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 ZW10O43264 779 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 DUX1O43812 170 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 ULK1O75385 1050 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 KRT6AP02538 564 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 KRT6BP04259 564 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 IDO1P14902 403 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 CSRP1P21291 193 aaKnown RBP15.89■□□□□ 0.13
TPM1-219ENST00000559397 CCND1P24385 295 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 KRT6CP48668 564 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 STX1BP61266 288 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 PPP1CAP62136 330 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 KIR2DS3Q14952 304 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 MAPRE2Q15555 327 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 TRIP6Q15654 476 aaKnown RBP15.89■□□□□ 0.13
TPM1-219ENST00000559397 SMU1Q2TAY7 513 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 AMZ1Q400G9 498 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 AGKQ53H12 422 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 FUNDC1Q8IVP5 155 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 OR2A1Q8NGT9 310 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 AHCYL2Q96HN2 611 aaKnown RBP15.89■□□□□ 0.13
TPM1-219ENST00000559397 OR2A14Q96R47 310 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 BRINP2Q9C0B6 783 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 ABCG4Q9H172 646 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 EPHA6Q9UF33 1036 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 ENTPD2Q9Y5L3 495 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 UNC13CQ8NB66 2214 aa15.89■□□□□ 0.13
TPM1-219ENST00000559397 PTPRZ1P23471 2315 aaPredicted RBP15.88■□□□□ 0.13
TPM1-219ENST00000559397 SLC30A4O14863 429 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 MGRN1O60291 552 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 RPLP0P05388 317 aaKnown RBP15.88■□□□□ 0.13
TPM1-219ENST00000559397 JUPP14923 745 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 EZRP15311 586 aaKnown RBP15.88■□□□□ 0.13
TPM1-219ENST00000559397 NPPBP16860 134 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 ITGAXP20702 1163 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 PSMB5P28074 263 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 CSF2RBP32927 897 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 CASP2P42575 452 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 EMX2Q04743 252 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 CHIT1Q13231 466 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 ILKQ13418 452 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 TSTA3Q13630 321 aaPredicted RBP15.88■□□□□ 0.13
TPM1-219ENST00000559397 CPSF6Q16630 551 aaKnown RBP eCLIP15.88■□□□□ 0.13
TPM1-219ENST00000559397 ATP6AP1LQ52LC2 224 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 PRAMEF13Q5VWM6 474 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 CYB5D1Q6P9G0 228 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 LCTLQ6UWM7 567 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 GK5Q6ZS86 529 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 MIER2Q8N344 545 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 NCSTNQ92542 709 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 PPP3R2Q96LZ3 170 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 FARSBQ9NSD9 589 aaKnown RBP15.88■□□□□ 0.13
TPM1-219ENST00000559397 TMEM45AQ9NWC5 275 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 POMT2Q9UKY4 750 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 ZNF490Q9ULM2 529 aaPredicted RBP15.88■□□□□ 0.13
TPM1-219ENST00000559397 SNX6Q9UNH7 406 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 PCDHB11Q9Y5F2 797 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 CFAP54Q96N23 3096 aa15.88■□□□□ 0.13
TPM1-219ENST00000559397 SNRNP200O75643 2136 aaKnown RBP15.88■□□□□ 0.13
TPM1-219ENST00000559397 GSAPA4D1B5 854 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 C2orf74A8MZ97 194 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 ISM1B1AKI9 464 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 NPIPB8E9PQR5 432 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 NTN3O00634 580 aaPredicted RBP15.87■□□□□ 0.13
TPM1-219ENST00000559397 CAPN5O15484 640 aaPredicted RBP15.87■□□□□ 0.13
TPM1-219ENST00000559397 RGS14O43566 566 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 UGT2B7P16662 529 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 PGM1P36871 562 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 RAP1GDS1P52306 607 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 DIO3P55073 304 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 YBX1P67809 324 aaKnown RBP15.87■□□□□ 0.13
TPM1-219ENST00000559397 MXRA7P84157 204 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 SLC25A3Q00325 362 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 IRF8Q02556 426 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 ZNF33BQ06732 778 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 CUL3Q13618 768 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
TPM1-219ENST00000559397 WDR74Q6RFH5 385 aaPredicted RBP15.87■□□□□ 0.13
TPM1-219ENST00000559397 USP53Q70EK8 1073 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 TMPRSS9Q7Z410 1059 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 FAM13CQ8NE31 585 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 SLC22A18Q96BI1 424 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 HBEGFQ99075 208 aa15.87■□□□□ 0.13
TPM1-219ENST00000559397 ACAT2Q9BWD1 397 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms