RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 FOXO6A8MYZ6 492 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 C21orf140B9A014 251 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 UBXN8O00124 270 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 CCNYL3P0C7X3 344 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 MTHFD2P13995 350 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 ATP5F1P24539 256 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-224ENST00000559361 DCTP40126 519 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 KCNC1P48547 511 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 PIK3CGP48736 1102 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 ABATP80404 500 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 ASPHQ12797 758 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 SETDB1Q15047 1291 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 SLC5A12Q1EHB4 618 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.11■□□□□ 0.17
PSEN1-224ENST00000559361 ZYG11AQ6WRX3 759 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 LRRC70Q7Z2Q7 622 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 MAMDC2Q7Z304 686 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-224ENST00000559361 SPNS2Q8IVW8 549 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 TMEM151AQ8N4L1 468 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 CCDC63Q8NA47 563 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 TCP10LQ8TDR4 215 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 HAUS8Q9BT25 410 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 SGPP1Q9BX95 441 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 CAPS2Q9BXY5 557 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 LHX9Q9NQ69 397 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 CPSF2Q9P2I0 782 aaKnown RBP16.11■□□□□ 0.17
PSEN1-224ENST00000559361 PLAGL1Q9UM63 463 aa16.11■□□□□ 0.17
PSEN1-224ENST00000559361 STK16O75716 305 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 CLDN1O95832 211 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 MYL2P10916 166 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 HRH2P25021 359 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 COL8A1P27658 744 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 RPA3P35244 121 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-224ENST00000559361 SLC6A12P48065 614 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 PRKAA2P54646 552 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 TBPL1P62380 186 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 PCBP2Q15366 365 aaKnown RBP eCLIP16.1■□□□□ 0.17
PSEN1-224ENST00000559361 PFKFB4Q16877 469 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 LRRC56Q8IYG6 542 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-224ENST00000559361 CT55Q8WUE5 264 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 THAP4Q8WY91 577 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 KLHL6Q8WZ60 621 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 RSC1A1Q92681 617 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 EXT2Q93063 718 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 ARL8AQ96BM9 186 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 IL17FQ96PD4 163 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 XKR8Q9H6D3 395 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 INTS7Q9NVH2 962 aaKnown RBP16.1■□□□□ 0.17
PSEN1-224ENST00000559361 NKIRAS1Q9NYS0 192 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 ACTR10Q9NZ32 417 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 COPG2Q9UBF2 871 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 POMT2Q9UKY4 750 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 EMCNQ9ULC0 261 aa16.1■□□□□ 0.17
PSEN1-224ENST00000559361 GSAPA4D1B5 854 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 NCF1BA6NI72 391 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-224ENST00000559361 NCF1CA8MVU1 366 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-224ENST00000559361 TCP11X1B4DZS4 312 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 BTN3A3O00478 584 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 SPAG7O75391 227 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 NCF1P14598 390 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-224ENST00000559361 CPA3P15088 417 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 TYRP1P17643 537 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 POLR2CP19387 275 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-224ENST00000559361 SEPHS1P49903 392 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 PGDP52209 483 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 NAE1Q13564 534 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 INPP5JQ15735 1006 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-224ENST00000559361 UGT8Q16880 541 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 EIF2S3LQ2VIR3 472 aaKnown RBP16.09■□□□□ 0.17
PSEN1-224ENST00000559361 PTCHD3Q3KNS1 767 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 PRAMEF13Q5VWM6 474 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 SPESP1Q6UW49 350 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 LCTLQ6UWM7 567 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 MBOAT1Q6ZNC8 495 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 PRSS42Q7Z5A4 293 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 PTGR2Q8N8N7 351 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-224ENST00000559361 LMNTD1Q8N9Z9 388 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 Q8NA96 180 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 FAM111AQ96PZ2 611 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 SLC25A23Q9BV35 468 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 C1QTNF3Q9BXJ4 246 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 CD244Q9BZW8 370 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 ACTL8Q9H568 366 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 KCNK9Q9NPC2 374 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 GPRC5BQ9NZH0 403 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 SEMA5BQ9P283 1151 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 KLK4Q9Y5K2 254 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 FBN2P35556 2912 aa16.09■□□□□ 0.17
PSEN1-224ENST00000559361 APCP25054 2843 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 MDC1Q14676 2089 aaKnown RBP16.08■□□□□ 0.16
PSEN1-224ENST00000559361 A0A1W2PPV9 198 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 TMEM120BA0PK00 339 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 TLCD2A6NGC4 264 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 A8MT66 165 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 ISM1B1AKI9 464 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 K7EPI3 171 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 PRICKLE3O43900 615 aaPredicted RBP16.08■□□□□ 0.16
PSEN1-224ENST00000559361 TIAF1O95411 115 aa16.08■□□□□ 0.16
PSEN1-224ENST00000559361 SBK3P0C264 359 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms