RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SEC16AO15027 2179 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 A0A087WUV0 522 aaPredicted RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 A0A088AWK7 358 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 TRBC2A0A5B9 178 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 FEZF1A0PJY2 475 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 A6NL46 340 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CDC7O00311 574 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CLGNO14967 610 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PHGDHO43175 533 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 SLC28A2O43868 658 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 NRP2O60462 931 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 STK16O75716 305 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 DNAJB5O75953 348 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 C1QL1O75973 258 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 KRT38O76015 456 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 WDR47O94967 919 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 NSA2O95478 260 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 ACSL3O95573 720 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ONECUT2O95948 504 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 SERPIND1P05546 499 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CAPN1P07384 714 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 HEXBP07686 556 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CTSBP07858 339 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 UQCRHP07919 91 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CYC1P08574 325 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 LTA4HP09960 611 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 ZGLP1P0C6A0 271 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CDH1P12830 882 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ICAM2P13598 275 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ACPPP15309 386 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CD1DP15813 335 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ZNF10P21506 573 aaPredicted RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 IL10P22301 178 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 JAK1P23458 1154 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CNTFP26441 200 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 GSTM2P28161 218 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 AHRP35869 848 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 MSH2P43246 934 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 SERPINB9P50453 376 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PGDP52209 483 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PGGT1BP53609 377 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 STXBP1P61764 594 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 AP2B1P63010 937 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 YBX1P67809 324 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 CSNK1G2P78368 415 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 NFKB2Q00653 900 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 KLC1Q07866 573 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 RGS1Q08116 209 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 KLRB1Q12918 225 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 AIMP2Q13155 320 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 PWP1Q13610 501 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ATP1A4Q13733 1029 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 COL9A2Q14055 689 aaPredicted RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 ACAP2Q15057 778 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 RBBP5Q15291 538 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 ZKSCAN8Q15776 578 aaPredicted RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 RBBP7Q16576 425 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 NKG7Q16617 165 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 HIST2H2ACQ16777 129 aaPredicted RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 PPP1R3AQ16821 1122 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 HKDC1Q2TB90 917 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PRTGQ2VWP7 1150 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 MINDY4Q4G0A6 757 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PAGE2BQ5JRK9 111 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 DCAF10Q5QP82 559 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 MFSD4BQ5TF39 518 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 MROH9Q5TGP6 573 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 FAM69BQ5VUD6 431 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 HIST2H2AA3Q6FI13 130 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 TMEM214Q6NUQ4 689 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 SBSNQ6UWP8 590 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 TMEM207Q6UWW9 146 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 SHISA6Q6ZSJ9 500 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ABHD13Q7L211 337 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 MRGPREQ86SM8 312 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 TMPRSS11BQ86T26 416 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ASPGQ86U10 573 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 HPS6Q86YV9 775 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PLD3Q8IV08 490 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 SPATA6LQ8N4H0 392 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 METTL27Q8N6F8 245 aaPredicted RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 MFSD9Q8NBP5 474 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 NOA1Q8NC60 698 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 RHEBL1Q8TAI7 183 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 STT3BQ8TCJ2 826 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ADAMTS17Q8TE56 1095 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 ANKRD49Q8WVL7 239 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 SLC5A11Q8WWX8 675 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 METTL21AQ8WXB1 218 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 NEIL2Q969S2 332 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 RHBDF1Q96CC6 855 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 MRRFQ96E11 262 aaKnown RBP4.16□□□□□ -1.74
SNX1-205ENST00000559339 SEC16BQ96JE7 1060 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 UBXN10Q96LJ8 280 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 C10orf90Q96M02 699 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 CCDC77Q9BR77 488 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 MCMBPQ9BTE3 642 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 SARGQ9BW04 601 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 SEMA4CQ9C0C4 833 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PITHD1Q9GZP4 211 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms