RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 FAM227AF5H4B4 570 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 NPHS1O60500 1241 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 NIPSNAP2O75323 286 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 RENP00797 406 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 PRNPP04156 253 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 HSD11B1P28845 292 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 PBX1P40424 430 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 DGKQP52824 942 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 PRR5P85299 388 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 PTPRCAPQ14761 206 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 ZNF829Q3KNS6 432 aaPredicted RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 OR6C4Q8NGE1 309 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 KLHL6Q8WZ60 621 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 ISOC1Q96CN7 298 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 CPNE2Q96FN4 548 aaPredicted RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 FBRSQ9HAH7 460 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 TPT1P8Q9HAU6 139 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 KLRF1Q9NZS2 232 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 SH3BGRL2Q9UJC5 107 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 RNF6Q9Y252 685 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 PTCH2Q9Y6C5 1203 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 JUNP05412 331 aaKnown RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 ZNF3P17036 446 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 ENGP17813 658 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 CD72P21854 359 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 HNRNPH3P31942 346 aaKnown RBP13.59□□□□□ -0.23
SPG11-210ENST00000558319 SLC2A7Q6PXP3 512 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 SUSD1Q6UWL2 747 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 NPAS4Q8IUM7 802 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 SACM1LQ9NTJ5 587 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 GDAP2Q9NXN4 497 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 TNFRSF10DQ9UBN6 386 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 FZD4Q9ULV1 537 aa13.59□□□□□ -0.23
SPG11-210ENST00000558319 LRCH4O75427 683 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 CPNE6O95741 557 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 SLC1A2P43004 574 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 MAP2K4P45985 399 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 ACOT12Q8WYK0 555 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 DUSP26Q9BV47 211 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 LRRC3Q9BY71 257 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 SMURF2Q9HAU4 748 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 CD320Q9NPF0 282 aa13.58□□□□□ -0.23
SPG11-210ENST00000558319 HGSNATQ68CP4 663 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 NOXRED1Q6NXP6 359 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 NUP54Q7Z3B4 507 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 OR5T1Q8NG75 326 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 SDCBP2Q9H190 292 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 CCDC163A0A0D9SF12 145 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 YJEFN3A6XGL0 299 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 GNG2P59768 71 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 RASGEF1BQ0VAM2 473 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 DUSP28Q4G0W2 176 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 Q6ZVU0 165 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 TMIEQ8NEW7 156 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 OR8K3Q8NH51 312 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 THEM6Q8WUY1 208 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 CNTN6Q9UQ52 1028 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 TEX13DA0A0J9YY54 714 aaPredicted RBP13.58□□□□□ -0.24
SPG11-210ENST00000558319 FAM234BA2RU67 622 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 INPPL1O15357 1258 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 PEPDP12955 493 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 E2F1Q01094 437 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 ATAD3CQ5T2N8 411 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 GRASPQ7Z6J2 395 aaPredicted RBP13.58□□□□□ -0.24
SPG11-210ENST00000558319 BEND7Q8N7W2 519 aaPredicted RBP13.58□□□□□ -0.24
SPG11-210ENST00000558319 AQP11Q8NBQ7 271 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 ASB9Q96DX5 294 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 BRF2Q9HAW0 419 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 POLMQ9NP87 494 aaPredicted RBP13.58□□□□□ -0.24
SPG11-210ENST00000558319 KCNN3Q9UGI6 736 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 MAFKO60675 156 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 CILPO75339 1184 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 KAT7O95251 611 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 C8BP07358 591 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 PRKACAP17612 351 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 ZNF542PQ5EBM4 170 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 ZSCAN1Q8NBB4 408 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 TBC1D15Q8TC07 691 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 DGAT2Q96PD7 388 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 DNAJC27Q9NZQ0 273 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 C14orf166Q9Y224 244 aaKnown RBP13.58□□□□□ -0.24
SPG11-210ENST00000558319 PCDHA2Q9Y5H9 948 aa13.58□□□□□ -0.24
SPG11-210ENST00000558319 C5orf60A6NFR6 353 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 FBP2O00757 339 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 NDST3O95803 873 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 MAD2L1BPQ15013 274 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 TIGD4Q8IY51 512 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 MSLNLQ96KJ4 702 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 SLC35A5Q9BS91 424 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 AKTIPQ9H8T0 292 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 TM9SF3Q9HD45 589 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 PRKD1Q15139 912 aaPredicted RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 EIF5AL1Q6IS14 154 aaKnown RBP13.57□□□□□ -0.24
SPG11-210ENST00000558319 OR5T2Q8NGG2 359 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 TMEM74Q96NL1 305 aa13.57□□□□□ -0.24
SPG11-210ENST00000558319 OR2S2Q9NQN1 319 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms