RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ARF3P61204 181 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-234ENST00000557703 DCDP81605 110 aaKnown RBP13.08□□□□□ -0.32
SHMT2-234ENST00000557703 REEP5Q00765 189 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 ZNF844Q08AG5 666 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 ASPHQ12797 758 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 SPNS2Q8IVW8 549 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 FAM20CQ8IXL6 584 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 DSELQ8IZU8 1212 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 CYP4X1Q8N118 509 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 CSNK1A1LQ8N752 337 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 REPS1Q96D71 796 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 CLIP3Q96DZ5 547 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 TM4SF19Q96DZ7 209 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 CCNL2Q96S94 520 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-234ENST00000557703 RUFY1Q96T51 708 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 NTMT1Q9BV86 223 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 LHX9Q9NQ69 397 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 ABCF3Q9NUQ8 709 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 ZNF358Q9NW07 568 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 TMEM216Q9P0N5 145 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 KLHL20Q9Y2M5 609 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 SLC22A7Q9Y694 548 aa13.08□□□□□ -0.32
SHMT2-234ENST00000557703 HYKKA2RU49 373 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 SMIM23A6NLE4 172 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 TK2O00142 265 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 HAT1O14929 419 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 SERPINA6P08185 405 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 IMPDH1P20839 514 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 ARFIP1P53367 373 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 HERVK_113P63132 956 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 IRF8Q02556 426 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 RGS1Q08116 209 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 CLN3Q13286 438 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 TNFAIP8L3Q5GJ75 292 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 TMIGD1Q6UXZ0 262 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 TMPRSS11BQ86T26 416 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 ZFAND4Q86XD8 727 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 BANPQ8N9N5 519 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 SNX31Q8N9S9 440 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 ZSCAN1Q8NBB4 408 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 OR2W6PQ8NHA6 318 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 SNRNP27Q8WVK2 155 aaKnown RBP13.07□□□□□ -0.32
SHMT2-234ENST00000557703 SLC13A3Q8WWT9 602 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 SREK1Q8WXA9 508 aaKnown RBP13.07□□□□□ -0.32
SHMT2-234ENST00000557703 EXT2Q93063 718 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 APOPT1Q96IL0 206 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 ERVK-6Q9BXR3 956 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 CNTNAP3Q9BZ76 1288 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 SPRTNQ9H040 489 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-234ENST00000557703 CUTCQ9NTM9 273 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 CPSF2Q9P2I0 782 aaKnown RBP13.07□□□□□ -0.32
SHMT2-234ENST00000557703 PLLPQ9Y342 182 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 PCDHGA11Q9Y5H2 935 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
SHMT2-234ENST00000557703 LOC105369274A0A096LPK9 316 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 LOC102723532A0A0G2JNH3 316 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 C9J4A7 227 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 H0YIG0 161 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 GOLGA8RI6L899 631 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 E2F3O00716 465 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 KLK10O43240 276 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 OR1F1O43749 312 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 PLIN3O60664 434 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 CLEC3AO75596 197 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 TIAF1O95411 115 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 MLYCDO95822 493 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 OTCP00480 354 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 NTRK1P04629 796 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 SBK3P0C264 359 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 PRKAA2P54646 552 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 DNAJB13P59910 316 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 RPS15P62841 145 aaKnown RBP13.06□□□□□ -0.32
SHMT2-234ENST00000557703 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
SHMT2-234ENST00000557703 GTF2H2Q13888 395 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 HERC3Q15034 1050 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 DEFB110Q30KQ9 67 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 XKR6Q5GH73 641 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 CATSPEREQ5SY80 951 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 CEP85LQ5SZL2 805 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 FRMPD2BQ6IN97 320 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 GTF2H2CQ6P1K8 395 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 ASPGQ86U10 573 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 SPACA3Q8IXA5 215 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 OR4N4Q8N0Y3 316 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 TEX9Q8N6V9 391 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 PTGR2Q8N8N7 351 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-234ENST00000557703 L3MBTL4Q8NA19 623 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 GALNT6Q8NCL4 622 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 SRFBP1Q8NEF9 429 aaKnown RBP13.06□□□□□ -0.32
SHMT2-234ENST00000557703 NT5CQ8TCD5 201 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 PMEPA1Q969W9 287 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 FKBP10Q96AY3 582 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 L3HYPDHQ96EM0 354 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 SLC45A3Q96JT2 553 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 ZIM3Q96PE6 472 aa13.06□□□□□ -0.32
SHMT2-234ENST00000557703 GBP5Q96PP8 586 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms