RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 BIN1O00499 593 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 TUBB4AP04350 444 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 PGRP06401 933 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 CYC1P08574 325 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 CD48P09326 243 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 ENDOUP21128 410 aaKnown RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 PSMB5P28074 263 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 CEACAM8P31997 349 aaPredicted RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 MAN2A2P49641 1150 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 AGTR2P50052 363 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 ARF3P61204 181 aaPredicted RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 GBE1Q04446 702 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 ACTN3Q08043 901 aaPredicted RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 BRD3Q15059 726 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 PAFAH1B3Q15102 231 aaKnown RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 ABHD13Q7L211 337 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 SLC22A16Q86VW1 577 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 SLC25A41Q8N5S1 370 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 ELP5Q8TE02 316 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 IGFBPL1Q8WX77 278 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 RNF166Q96A37 237 aaPredicted RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 ZUFSPQ96AP4 578 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 PIK3IP1Q96FE7 263 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 DRC3Q9H069 523 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 NDST4Q9H3R1 872 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 SYNPO2LQ9H987 977 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 VPS37BQ9H9H4 285 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 PARVAQ9NVD7 372 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 UBP1Q9NZI7 540 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 SPRR3Q9UBC9 169 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 LPAR3Q9UBY5 353 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
NEDD1-211ENST00000557454 TESMINQ9Y4I5 508 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 DUSP10Q9Y6W6 482 aa8.74□□□□□ -1.01
NEDD1-211ENST00000557454 TARM1B6A8C7 271 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 G3V3Y1 287 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 FCHO1O14526 889 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 STX7O15400 261 aaKnown RBP8.73□□□□□ -1.01
NEDD1-211ENST00000557454 KDM1AO60341 852 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 GLSO94925 669 aaPredicted RBP8.73□□□□□ -1.01
NEDD1-211ENST00000557454 SRD5A1P18405 259 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 CD9P21926 228 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 PCK1P35558 622 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 IFI35P80217 286 aaPredicted RBP8.73□□□□□ -1.01
NEDD1-211ENST00000557454 KRT81Q14533 505 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 BOLA3Q53S33 107 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 SIRPB2Q5JXA9 342 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 CCDC183Q5T5S1 534 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 LIPNQ5VXI9 398 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 FBXO42Q6P3S6 717 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 LRRC8BQ6P9F7 803 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 RGS9BPQ6ZS82 235 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 PLEKHM3Q6ZWE6 761 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 LIX1Q8N485 282 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 FAM109AQ8N4B1 249 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 ARHGEF39Q8N4T4 335 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 TMEM251Q8N6I4 163 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 CSNK1A1LQ8N752 337 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 PSD4Q8NDX1 1056 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 OR2M7Q8NG81 312 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 SLC22A8Q8TCC7 542 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 TMEM171Q8WVE6 324 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 TSLPQ969D9 159 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 COPS8Q99627 209 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 MIPEPQ99797 713 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 WDR83Q9BRX9 315 aaKnown RBP8.73□□□□□ -1.01
NEDD1-211ENST00000557454 RBM24Q9BX46 236 aaKnown RBP8.73□□□□□ -1.01
NEDD1-211ENST00000557454 SHARPINQ9H0F6 387 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 SLC25A51Q9H1U9 297 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 GANQ9H2C0 597 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 EPB41L4BQ9H329 900 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 CXorf56Q9H5V9 222 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 FAM96AQ9H5X1 160 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 LDAHQ9H6V9 325 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 EXO5Q9H790 373 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 L2HGDHQ9H9P8 463 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 TIMMDC1Q9NPL8 285 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 GALNT8Q9NY28 637 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 KCMF1Q9P0J7 381 aa8.73□□□□□ -1.01
NEDD1-211ENST00000557454 A0A0U1RQJ8 604 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 ATP6AP2A0A1C7CYW4 349 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 PES1O00541 588 aaKnown RBP8.72□□□□□ -1.01
NEDD1-211ENST00000557454 GPRIN2O60269 458 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 SUSD5O60279 629 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 ATP6AP2O75787 350 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 CYLC1P35663 651 aaPredicted RBP8.72□□□□□ -1.01
NEDD1-211ENST00000557454 XCR1P46094 333 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 JAM2P57087 298 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 SLC10A2Q12908 348 aaPredicted RBP8.72□□□□□ -1.01
NEDD1-211ENST00000557454 PTK6Q13882 451 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 ABRAXAS2Q15018 415 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 SLC14A2Q15849 920 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 TYSND1Q2T9J0 566 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 ACSF3Q4G176 576 aaPredicted RBP8.72□□□□□ -1.01
NEDD1-211ENST00000557454 KIAA0408Q6ZU52 694 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 MICALCLQ6ZW33 695 aa8.72□□□□□ -1.01
NEDD1-211ENST00000557454 OTOAQ7RTW8 1153 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms