RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 HPS4Q9NQG7 708 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ACSS1Q9NUB1 689 aaPredicted RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 C2orf42Q9NWW7 574 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 GTF3C4Q9UKN8 822 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 ITGA11Q9UKX5 1188 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 CCL26Q9Y258 94 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 MAU2Q9Y6X3 613 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 RIF1Q5UIP0 2472 aaKnown RBP4.91□□□□□ -1.62
HIF1A-209ENST00000556827 C2orf16Q68DN1 1984 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 GVINP1Q7Z2Y8 2422 aa4.91□□□□□ -1.62
HIF1A-209ENST00000556827 LNP1A1A4G5 178 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 AP5Z1O43299 807 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 SLC25A12O75746 678 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GAGE7O76087 117 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 TNNC2P02585 160 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 APODP05090 189 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GAGE12FP0CL80 117 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GAGE12GP0CL81 117 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GAGE12IP0CL82 117 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 HMGA1P17096 107 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GAP43P17677 238 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 TRIM21P19474 475 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 CYP2F1P24903 491 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 PPARGP37231 505 aaPredicted RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 MAGEA11P43364 429 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF131P52739 623 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 EEF1A2Q05639 463 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 NIPAL4Q0D2K0 466 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GAGE1Q13065 139 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GAGE4Q13068 117 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 SNTA1Q13424 505 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 IL17AQ16552 155 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 KIF19Q2TAC6 998 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 CFAP221Q4G0U5 840 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 LRIF1Q5T3J3 769 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GKAP1Q5VSY0 366 aaPredicted RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 SDHAF4Q5VUM1 108 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 LYSMD4Q5XG99 296 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 PMS2CLQ68D20 193 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 KCTD18Q6PI47 426 aaPredicted RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF329Q86UD4 541 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 SATL1Q86VE3 508 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 ODF3L1Q8IXM7 274 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 ADGRF2Q8IZF7 708 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 PDCL2Q8N4E4 241 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 WDTC1Q8N5D0 677 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 LRRC52Q8N7C0 313 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 STKLD1Q8NE28 680 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 RAD54LQ92698 747 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 ANKRD36BP1Q96IX9 119 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 CNOT6LQ96LI5 555 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 C1orf74Q96LT6 269 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 CYP2S1Q96SQ9 504 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 BARD1Q99728 777 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 GTPBP2Q9BX10 602 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 NACA2Q9H009 215 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 LINC00597Q9H2U6 94 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 SNX25Q9H3E2 840 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 ST6GALNAC4Q9H4F1 302 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 RETREG1Q9H6L5 497 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF556Q9HAH1 456 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 SEPT11Q9NVA2 429 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 RBAKQ9NYW8 714 aaPredicted RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 SMARCAL1Q9NZC9 954 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 MMP17Q9ULZ9 603 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 R3HDM2Q9Y2K5 976 aaKnown RBP4.9□□□□□ -1.63
HIF1A-209ENST00000556827 NEUROG3Q9Y4Z2 214 aa4.9□□□□□ -1.63
HIF1A-209ENST00000556827 CACNA1AO00555 2505 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 SPTBN4Q9H254 2564 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 A0A1B0GUV1 79 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 EIF4E1BA6NMX2 242 aaKnown RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ANKRD63C9JTQ0 380 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 GRID2O43424 1007 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 FAM189A1O60320 539 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF217O75362 1048 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 NOL4O94818 638 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 GCNT3O95395 438 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 KLF8O95600 359 aaPredicted RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 GNSP15586 552 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ACAT1P24752 427 aaKnown RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 EIF2DP41214 584 aaKnown RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 TNFRSF4P43489 277 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 GALCP54803 685 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 IRX4P78413 519 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 SLC20A2Q08357 652 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 MAMLD1Q13495 774 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ALCAMQ13740 583 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF77Q15935 545 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 DUOXA1Q1HG43 343 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ZC2HC1CQ53FD0 456 aaPredicted RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 KLHL35Q6PF15 583 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 DENND5BQ6ZUT9 1274 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF720Q7Z2F6 126 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 TMEM150AQ86TG1 271 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 PCDH20Q8N6Y1 951 aaKnown RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF441Q8N8Z8 693 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 DEFB124Q8NES8 71 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 OTUB2Q96DC9 234 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 HPDLQ96IR7 371 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms