RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ICAM2P13598 275 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 CSNK1G2P78368 415 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 NAE1Q13564 534 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 SPANXN3Q5MJ09 141 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 MBOAT1Q6ZNC8 495 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 RIPOR1Q6ZS17 1223 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 C17orf64Q86WR6 236 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 MYO1HQ8N1T3 1032 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 BCORP1Q8N888 145 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 METTL21AQ8WXB1 218 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 MAGEB10Q96LZ2 347 aaPredicted RBP21.4■■□□□ 1.02
ACTN1-220ENST00000556433 SNX12Q9UMY4 172 aa21.4■■□□□ 1.02
ACTN1-220ENST00000556433 SVILO95425 2214 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 TRAV17A0A0B4J275 112 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 SLC16A5O15375 505 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 NSA2O95478 260 aaKnown RBP21.39■■□□□ 1.01
ACTN1-220ENST00000556433 AHSGP02765 367 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 HIST1H2AGP0C0S8 130 aaPredicted RBP21.39■■□□□ 1.01
ACTN1-220ENST00000556433 HIST1H2ADP20671 130 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 TNFSF10P50591 281 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 EFNA3P52797 238 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 CDKN2DP55273 166 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 MSS51Q4VC12 460 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 RBM20Q5T481 1227 aaKnown RBP21.39■■□□□ 1.01
ACTN1-220ENST00000556433 MFSD4BQ5TF39 518 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 PRSS41Q7RTY9 318 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 PCGF5Q86SE9 256 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 AMER2Q8N7J2 671 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 CAMKVQ8NCB2 501 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 HIST1H2AHQ96KK5 128 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 IMMP1LQ96LU5 166 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 CYTH2Q99418 400 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 HIST1H2AJQ99878 128 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 H2AFJQ9BTM1 129 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 TUBB6Q9BUF5 446 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 VN1R1Q9GZP7 353 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.39■■□□□ 1.011e-6■■□□□ 14.2
ACTN1-220ENST00000556433 DDX47Q9H0S4 455 aaKnown RBP21.39■■□□□ 1.01
ACTN1-220ENST00000556433 OLAHQ9NV23 265 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 SH2B3Q9UQQ2 575 aa21.39■■□□□ 1.01
ACTN1-220ENST00000556433 FEZF1A0PJY2 475 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 CES2O00748 559 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 LRRTM2O43300 516 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 ZSCAN12O43309 604 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 F10P00742 488 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 ITGAMP11215 1152 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 IL1RNP18510 177 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 AP2B1P63010 937 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 SP140Q13342 867 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 BBS9Q3SYG4 887 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 MINDY4Q4G0A6 757 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 TMEM214Q6NUQ4 689 aaKnown RBP21.38■■□□□ 1.01
ACTN1-220ENST00000556433 LURAP1LQ8IV03 231 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 IGDCC3Q8IVU1 814 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 SHISA5Q8N114 240 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 OR51Q1Q8NH59 317 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 TM4SF19Q96DZ7 209 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 LINGO1Q96FE5 620 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 NAT9Q9BTE0 207 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 HCN3Q9P1Z3 774 aa21.38■■□□□ 1.01
ACTN1-220ENST00000556433 SGK494L7N484 410 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 LCMT2O60294 686 aaKnown RBP21.37■■□□□ 1.01
ACTN1-220ENST00000556433 CDH1P12830 882 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 CCND1P24385 295 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 GRK3P35626 688 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 BCL6P41182 706 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 PHKG1Q16816 387 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 ZNF787Q6DD87 383 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 LCTLQ6UWM7 567 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 KIAA0408Q6ZU52 694 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 ASPGQ86U10 573 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 CNTN4Q8IWV2 1026 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 KCT2Q8NC54 265 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 ZCCHC10Q8TBK6 192 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 SLC13A3Q8WWT9 602 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 SLX1AQ9BQ83 275 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 SGPP1Q9BX95 441 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 ANKHQ9HCJ1 492 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 PPANQ9NQ55 473 aaKnown RBP21.37■■□□□ 1.01
ACTN1-220ENST00000556433 UNC79Q9P2D8 2635 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 ZGRF1Q86YA3 2104 aa21.37■■□□□ 1.01
ACTN1-220ENST00000556433 IGHV3-20A0A0C4DH32 117 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 WDPCPO95876 746 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 NPPBP16860 134 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 XCR1P46094 333 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 IL2P60568 153 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 ABHD17BQ5VST6 288 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 CAPN13Q6MZZ7 669 aaPredicted RBP21.36■■□□□ 1.01
ACTN1-220ENST00000556433 CPEB2Q7Z5Q1 589 aaKnown RBP21.36■■□□□ 1.01
ACTN1-220ENST00000556433 SLC26A11Q86WA9 606 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 CERS2Q96G23 380 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 TAAR6Q96RI8 345 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 FAM129AQ9BZQ8 928 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 TRMT1Q9NXH9 659 aaKnown RBP21.36■■□□□ 1.01
ACTN1-220ENST00000556433 STMN3Q9NZ72 180 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 SLC17A6Q9P2U8 582 aa21.36■■□□□ 1.01
ACTN1-220ENST00000556433 C19orf25Q9UFG5 118 aaPredicted RBP21.36■■□□□ 1.01
ACTN1-220ENST00000556433 PABPN1LA6NDY0 278 aaKnown RBP21.35■■□□□ 1.01
ACTN1-220ENST00000556433 OR2W5A6NFC9 320 aa21.35■■□□□ 1.01
ACTN1-220ENST00000556433 A8MUI8 341 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms