RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KCNAB1Q14722 419 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 RTP5Q14D33 572 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 GPR19Q15760 415 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ZIC1Q15915 447 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 NDUFA9Q16795 377 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 FAM214AQ32MH5 1076 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 TTMPQ5BVD1 217 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 TTC19Q6DKK2 380 aaPredicted RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 GRHL2Q6ISB3 625 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 FBXO42Q6P3S6 717 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 IGF2-ASQ6U949 168 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 GPRIN3Q6ZVF9 776 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ASPGQ86U10 573 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 TMEM126BQ8IUX1 230 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 CSNK1A1LQ8N752 337 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 BMPERQ8N8U9 685 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 MFSD9Q8NBP5 474 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 TRPV3Q8NET8 790 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 MGARPQ8TDB4 240 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 TRPC4APQ8TEL6 797 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 USP7Q93009 1102 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ZNF501Q96CX3 271 aaPredicted RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 TMEM237Q96Q45 408 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 OR2A5Q96R48 311 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ZNF382Q96SR6 550 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 CENPKQ9BS16 269 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 NDC1Q9BTX1 674 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SARGQ9BW04 601 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 GATA5Q9BWX5 397 aaPredicted RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 C12orf65Q9H3J6 166 aaKnown RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 THSD1Q9NS62 852 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 GEMIN8Q9NWZ8 242 aaKnown RBP7.31□□□□□ -1.24
TDP1-214ENST00000556063 ZFP69BQ9UJL9 534 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 PILRAQ9UKJ1 303 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 KLK13Q9UKR3 277 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ANGPTL2Q9UKU9 493 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SNX6Q9UNH7 406 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SRPK3Q9UPE1 567 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 SH2B3Q9UQQ2 575 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 MSRB2Q9Y3D2 182 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 ASB1Q9Y576 335 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 PCDHGA7Q9Y5G6 932 aa7.31□□□□□ -1.24
TDP1-214ENST00000556063 COL27A1Q8IZC6 1860 aaPredicted RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 CACNA1AO00555 2505 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 NCOR2Q9Y618 2525 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 FEZF1A0PJY2 475 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 WDR91A4D1P6 747 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 TMEM114B3SHH9 223 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 H0YIV9 168 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 HAT1O14929 419 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 NVLO15381 856 aaKnown RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 ZSCAN9O15535 394 aaPredicted RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 PRAMEF10O60809 474 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 CLEC3AO75596 197 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 SCRG1O75711 98 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 DXOO77932 396 aaKnown RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 ESRRBO95718 433 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 CHEK2O96017 543 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 KRT6AP02538 564 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 KRT6BP04259 564 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 SERPIND1P05546 499 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 KLK3P07288 261 aaPredicted RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 DHRS4L1P0CG22 281 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 PCNAP12004 261 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 HGFP14210 728 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 EPORP19235 508 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 ITIH1P19827 911 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 NR1D1P20393 614 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 HMOX2P30519 316 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 PIK3CBP42338 1070 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 GABRA4P48169 554 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 KRT6CP48668 564 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 EMP3P54852 163 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 ERVPABLB-1P60509 514 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 STXBP1P61764 594 aaKnown RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 SHC2P98077 582 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 MEF2AQ02078 507 aaPredicted RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 ZNF33BQ06732 778 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 TGM3Q08188 693 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 GALNT1Q10472 559 aaPredicted RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 IFT88Q13099 833 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 PWP1Q13610 501 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 MPP2Q14168 576 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 E2F2Q14209 437 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 RCN2Q14257 317 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 CPSF6Q16630 551 aaKnown RBP eCLIP7.3□□□□□ -1.24
TDP1-214ENST00000556063 MUM1Q2TAK8 710 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 DEFB110Q30KQ9 67 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 GGTA1PQ4G0N0 100 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 WASHC2DQ5SRD0 308 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 GARNL3Q5VVW2 1013 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 ATG16L1Q676U5 607 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 NIPAL1Q6NVV3 410 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 FRMD7Q6ZUT3 714 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 PLD3Q8IV08 490 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 AFAP1L2Q8N4X5 818 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 L3MBTL4Q8NA19 623 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 SRFBP1Q8NEF9 429 aaKnown RBP7.3□□□□□ -1.24
TDP1-214ENST00000556063 OR1L3Q8NH93 324 aa7.3□□□□□ -1.24
TDP1-214ENST00000556063 RAB3IL1Q8TBN0 382 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms