RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RERGQ96A58 199 aaPredicted RBP13□□□□□ -0.33
SNX6-203ENST00000555416 COL26A1Q96A83 441 aa13□□□□□ -0.33
SNX6-203ENST00000555416 TM4SF19Q96DZ7 209 aa13□□□□□ -0.33
SNX6-203ENST00000555416 EGFL8Q99944 293 aa13□□□□□ -0.33
SNX6-203ENST00000555416 FUT8Q9BYC5 575 aa13□□□□□ -0.33
SNX6-203ENST00000555416 ACSS3Q9H6R3 686 aa13□□□□□ -0.33
SNX6-203ENST00000555416 IGSF5Q9NSI5 407 aa13□□□□□ -0.33
SNX6-203ENST00000555416 NFU1Q9UMS0 254 aa13□□□□□ -0.33
SNX6-203ENST00000555416 ASB1Q9Y576 335 aa13□□□□□ -0.33
SNX6-203ENST00000555416 A6NL46 340 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 SOCS6O14544 535 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 B3GALT4O96024 378 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 ANXA5P08758 320 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 FAM153BP0C7A2 387 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 RHOXF2BP0C7M4 288 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 SFTPCP11686 197 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 PLA2G2AP14555 144 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 FBLP22087 321 aaKnown RBP12.99□□□□□ -0.33
SNX6-203ENST00000555416 VARSP26640 1264 aaKnown RBP12.99□□□□□ -0.33
SNX6-203ENST00000555416 SLC26A3P40879 764 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 SLC6A12P48065 614 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 CCR8P51685 355 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 KLC1Q07866 573 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 RAPSNQ13702 412 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 UAP1Q16222 522 aaPredicted RBP12.99□□□□□ -0.33
SNX6-203ENST00000555416 FAM153CQ494X1 144 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 PRMT9Q6P2P2 845 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 FRA10AC1Q70Z53 315 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 GPSM1Q86YR5 675 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 RAB43Q86YS6 212 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 CENPLQ8N0S6 344 aaPredicted RBP12.99□□□□□ -0.33
SNX6-203ENST00000555416 CEP112Q8N8E3 955 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 ANKRD53Q8N9V6 530 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 MFSD9Q8NBP5 474 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 STT3BQ8TCJ2 826 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 KCTD4Q8WVF5 259 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 SLC5A11Q8WWX8 675 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 NXNL1Q96CM4 212 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 MMABQ96EY8 250 aaPredicted RBP12.99□□□□□ -0.33
SNX6-203ENST00000555416 CYTH2Q99418 400 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 RHOXF2Q9BQY4 288 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 DRC3Q9H069 523 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 WDR54Q9H977 334 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 ACSS2Q9NR19 701 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 P4HTMQ9NXG6 502 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 MTRF1LQ9UGC7 380 aaKnown RBP12.99□□□□□ -0.33
SNX6-203ENST00000555416 HS3ST3B1Q9Y662 390 aa12.99□□□□□ -0.33
SNX6-203ENST00000555416 HELZ2Q9BYK8 2649 aaKnown RBP12.99□□□□□ -0.33
SNX6-203ENST00000555416 SCN3AQ9NY46 2000 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 IGLV3-12A0A075B6K2 115 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 TRBC2A0A5B9 178 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 PABPN1LA6NDY0 278 aaKnown RBP12.98□□□□□ -0.33
SNX6-203ENST00000555416 MKRN2OSH3BPM6 223 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 OR1F1O43749 312 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 DNAJB6O75190 326 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 JRKO75564 520 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 CEACAM4O75871 244 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 WDR47O94967 919 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 ALDOAP04075 364 aaKnown RBP12.98□□□□□ -0.33
SNX6-203ENST00000555416 ZGLP1P0C6A0 271 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 PIM1P11309 404 aaPredicted RBP12.98□□□□□ -0.33
SNX6-203ENST00000555416 IL1RNP18510 177 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 REEP5Q00765 189 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 ILF2Q12905 390 aaKnown RBP12.98□□□□□ -0.33
SNX6-203ENST00000555416 DSG2Q14126 1118 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 LACTB2Q53H82 288 aaPredicted RBP12.98□□□□□ -0.33
SNX6-203ENST00000555416 GARNL3Q5VVW2 1013 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 TMEM214Q6NUQ4 689 aaKnown RBP12.98□□□□□ -0.33
SNX6-203ENST00000555416 TCTN3Q6NUS6 607 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 NXPE4Q6UWF7 544 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 KIRREL2Q6UWL6 708 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 RAPH1Q70E73 1250 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 TMPRSS11BQ86T26 416 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 ZNF605Q86T29 641 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 ASPGQ86U10 573 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 ISCA2Q86U28 154 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 KLHDC8AQ8IYD2 350 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 FDCSPQ8NFU4 85 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 ZCCHC10Q8TBK6 192 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 EXT2Q93063 718 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 KIAA1191Q96A73 305 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 THAP11Q96EK4 314 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 SARGQ9BW04 601 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 NUDT9Q9BW91 350 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 AICDAQ9GZX7 198 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 ALG9Q9H6U8 611 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 MLXIPLQ9NP71 852 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 SNX15Q9NRS6 342 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
SNX6-203ENST00000555416 OR2W5A6NFC9 320 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 C4orf51C9J302 202 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 SGK494L7N484 410 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 SUV39H1O43463 412 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 C2P06681 752 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 EPORP19235 508 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 TFEBP19484 476 aa12.97□□□□□ -0.33
SNX6-203ENST00000555416 MMP11P24347 488 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms