RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 NKAPQ8N5F7 415 aaKnown RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 LINC01555Q8NAE3 123 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CEP70Q8NHQ1 597 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 MCOLN3Q8TDD5 553 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 DLG3Q92796 817 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 MED8Q96G25 268 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 CLPTM1LQ96KA5 538 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 ZNF184Q99676 751 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 EPB41L1Q9H4G0 881 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 SYTL2Q9HCH5 934 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 S100A14Q9HCY8 104 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 SOHLH2Q9NX45 425 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 ACTR10Q9NZ32 417 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 PISDQ9UG56 409 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 PDE10AQ9Y233 779 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 LOXL2Q9Y4K0 774 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 ACACAQ13085 2346 aa9.5□□□□□ -0.89
PSEN1-213ENST00000555386 MDC1Q14676 2089 aaKnown RBP9.5□□□□□ -0.89
PSEN1-213ENST00000555386 IGHV5-51A0A0C4DH38 117 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 CCDC189A1A4V9 331 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 TRABD2BA6NFA1 517 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 SLC9B1P1A6NJY1 282 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 EFCAB7A8K855 629 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 A8MT66 165 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 C2orf74A8MZ97 194 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 GFYI3L273 518 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 PRAMEF10O60809 474 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 SLC16A8O95907 504 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 C8GP07360 202 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 HIST1H2AGP0C0S8 130 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-213ENST00000555386 JMJD7P0C870 316 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 CCL4P13236 92 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 UGT2B7P16662 529 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 HIST1H2ADP20671 130 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 IMPDH1P20839 514 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 EPHA3P29320 983 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 PRDX3P30048 256 aaKnown RBP9.49□□□□□ -0.89
PSEN1-213ENST00000555386 PEBP1P30086 187 aaKnown RBP9.49□□□□□ -0.89
PSEN1-213ENST00000555386 NAA20P61599 178 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 GABREP78334 506 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 ZFP36L1Q07352 338 aaKnown RBP9.49□□□□□ -0.89
PSEN1-213ENST00000555386 KLC1Q07866 573 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 FOXM1Q08050 763 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 MAPRE2Q15555 327 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 TSNQ15631 228 aaKnown RBP9.49□□□□□ -0.89
PSEN1-213ENST00000555386 SF1Q15637 639 aaKnown RBP9.49□□□□□ -0.89
PSEN1-213ENST00000555386 GSTA3Q16772 222 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 CCNYL1Q8N7R7 359 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 L3HYPDHQ96EM0 354 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 HIST1H2AHQ96KK5 128 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 HIST1H2AJQ99878 128 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 EGFL8Q99944 293 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 DPYSL5Q9BPU6 564 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 H2AFJQ9BTM1 129 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 TRIM54Q9BYV2 358 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 NUF2Q9BZD4 464 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 ATG10Q9H0Y0 220 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 ALG9Q9H6U8 611 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 MEAF6Q9HAF1 191 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 PARVBQ9HBI1 364 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 ZBTB26Q9HCK0 441 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 OCIAD1Q9NX40 245 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 ARL15Q9NXU5 204 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 OR6C2Q9NZP2 312 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 AKAP7Q9P0M2 348 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-213ENST00000555386 POMPQ9Y244 141 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 AHCTF1Q8WYP5 2266 aa9.49□□□□□ -0.89
PSEN1-213ENST00000555386 IGF2RP11717 2491 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 CCDC187A0A096LP49 1063 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 LOC100653049A0A140TA62 436 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 A0A1W2PNU3 283 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-213ENST00000555386 EIF3FO00303 357 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-213ENST00000555386 SDHDO14521 159 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 KRT34O76011 436 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 TNFSF15O95150 251 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 CCKBRP32239 447 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 ETV5P41161 510 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 LSSP48449 732 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 PNLIPRP1P54315 467 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 SH3BP2P78314 561 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-213ENST00000555386 SQSTM1Q13501 440 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 OR4D1Q15615 310 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 FBXO48Q5FWF7 155 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 ANKS6Q68DC2 871 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 SPESP1Q6UW49 350 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 CHSY3Q70JA7 882 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 DHDDSQ86SQ9 333 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 SNX32Q86XE0 403 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 TMEM126BQ8IUX1 230 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 PGAM4Q8N0Y7 254 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 AGBL5Q8NDL9 886 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 OR2L8Q8NGY9 312 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 RHEBL1Q8TAI7 183 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 OR2A14Q96R47 310 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 NR1H4Q96RI1 486 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-213ENST00000555386 CMKLR1Q99788 373 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 CTRCQ99895 268 aa9.48□□□□□ -0.89
PSEN1-213ENST00000555386 WDR55Q9H6Y2 383 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms