RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 TRAP1Q12931 704 aaKnown RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 DMP1Q13316 513 aaPredicted RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.721e-13■■■■■ 45.6
PABPN1-204ENST00000554062 CCDC6Q16204 474 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 ITPRIPL2Q3MIP1 535 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 SIRPB2Q5JXA9 342 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 PRAMEF8Q5VWM4 474 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 FAM166AQ6J272 317 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 NEK5Q6P3R8 708 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 PODNL1Q6PEZ8 512 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 CD164L2Q6UWJ8 174 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 RAD9BQ6WBX8 426 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 B3GLCTQ6Y288 498 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 C9orf47Q6ZRZ4 202 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 KCTD8Q6ZWB6 473 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 TUBA1AQ71U36 451 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 AQP12AQ8IXF9 295 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 OR10Q1Q8NGQ4 319 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 LRRC8CQ8TDW0 803 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 U2AF1L4Q8WU68 220 aaKnown RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 SECTM1Q8WVN6 248 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 FCRL4Q96PJ5 515 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 KCNK16Q96T55 309 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 PKP2Q99959 881 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 TUBA1CQ9BQE3 449 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 SLC29A3Q9BZD2 475 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 NYXQ9GZU5 481 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 FAM49AQ9H0Q0 323 aaPredicted RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 TMPRSS5Q9H3S3 457 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 CUEDC2Q9H467 287 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 FAM207AQ9NSI2 230 aaPredicted RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.3□□□□□ -1.722e-21■■□□□ 14.4
PABPN1-204ENST00000554062 MALT1Q9UDY8 824 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 C19orf25Q9UFG5 118 aaPredicted RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 FOXA2Q9Y261 457 aaPredicted RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 EXOC6BQ9Y2D4 811 aa4.3□□□□□ -1.72
PABPN1-204ENST00000554062 TCOF1Q13428 1488 aaKnown RBP4.3□□□□□ -1.72
PABPN1-204ENST00000554062 NPATQ14207 1427 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 MROH1Q8NDA8 1641 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 A0A087X0K7 114 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 SAA2-SAA4A0A096LPE2 208 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 C5orf60A6NFR6 353 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 ARHGAP42A6NI28 874 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 C17orf105B2RV13 164 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 C2CD4DB7Z1M9 353 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 TXNL1O43396 289 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 ACAA1P09110 424 aaPredicted RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 ZNF12P17014 697 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 DVL1P1P54792 670 aaPredicted RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 BRWD1-AS2P59051 145 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 LTBQ06643 244 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 LGALS3BPQ08380 585 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 DMPKQ09013 629 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 ZNF415Q09FC8 603 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 KIF5AQ12840 1032 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 PTPN14Q15678 1187 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 INAQ16352 499 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 HFEQ30201 348 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 CCDC40Q4G0X9 1142 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 HSP90AA5PQ58FG0 334 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 TEX35Q5T0J7 233 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 SUSD4Q5VX71 490 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 ZNF425Q6IV72 752 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 TTC27Q6P3X3 843 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 CTR9Q6PD62 1173 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 PRSS55Q6UWB4 352 aaPredicted RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 RBM43Q6ZSC3 357 aaKnown RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 BTN2A1Q7KYR7 527 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 G2E3Q7L622 706 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 SATL1Q86VE3 508 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 TMEM126BQ8IUX1 230 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 TMEM139Q8IV31 216 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 PELI3Q8N2H9 469 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 KDM8Q8N371 416 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 TMEM99Q8N816 258 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 CNNM3Q8NE01 707 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 OR11H4Q8NGC9 324 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 OR13C3Q8NGS6 347 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 LILRB1Q8NHL6 650 aaPredicted RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 URGCPQ8TCY9 931 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 ULK4Q96C45 1275 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 SLC47A1Q96FL8 570 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 IGSF21Q96ID5 467 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 FAM111AQ96PZ2 611 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 KRT23Q9C075 422 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 S1PR5Q9H228 398 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 GAREM1Q9H706 876 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 RPF1Q9H9Y2 349 aaKnown RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 ACTR3BQ9P1U1 418 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 IL36AQ9UHA7 158 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 UBQLN2Q9UHD9 624 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 KCNJ14Q9UNX9 436 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 RPH3AQ9Y2J0 694 aaPredicted RBP4.29□□□□□ -1.72
PABPN1-204ENST00000554062 KDM5DQ9BY66 1539 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 A2MP01023 1474 aa4.29□□□□□ -1.72
PABPN1-204ENST00000554062 CNTLNQ9NXG0 1405 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms