RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 PPIL1Q9Y3C6 166 aa5.09□□□□□ -1.59
TMEM55B-204ENST00000553602 SAMHD1Q9Y3Z3 626 aaKnown RBP5.09□□□□□ -1.59
TMEM55B-204ENST00000553602 PCDHGC4Q9Y5F7 938 aa5.09□□□□□ -1.59
TMEM55B-204ENST00000553602 PCDHGA3Q9Y5H0 932 aa5.09□□□□□ -1.59
TMEM55B-204ENST00000553602 PEX16Q9Y5Y5 336 aa5.09□□□□□ -1.59
TMEM55B-204ENST00000553602 BACE2Q9Y5Z0 518 aa5.09□□□□□ -1.59
TMEM55B-204ENST00000553602 DGKBQ9Y6T7 804 aa5.09□□□□□ -1.59
TMEM55B-204ENST00000553602 A0A075B6Q4 140 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 GLYATL1P3A0A0U1RQE8 302 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 C1orf226A1L170 272 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF840PA6NDX5 716 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CLCA1A8K7I4 914 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 LOC730098B7Z3J9 87 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 PTGES3LE9PB15 166 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 LOC110117498-PIK3R3F6TDL0 507 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 H0YIV9 168 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 TGFBR3LH3BV60 316 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 GFYI3L273 518 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CLIC1O00299 241 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 QSOX1O00391 747 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 FFAR3O14843 346 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 HAT1O14929 419 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 GPR42O15529 346 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 COCHO43405 550 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 DYRK3O43781 588 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 AIREO43918 545 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 PCDHGA12O60330 932 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 AOC2O75106 756 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RFPL2O75678 378 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 AP2A2O94973 939 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 SLC25A14O95258 325 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 MED26O95402 600 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 FADS2O95864 444 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 OLFM2O95897 454 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 PDYNP01213 254 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 KLKB1P03952 638 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RPLP0P05388 317 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RB1P06400 928 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CDK1P06493 297 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 PIPP12273 146 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 ITGA2P17301 1181 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 GABRB1P18505 474 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CORO1AP31146 461 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 FMO3P31513 532 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RPL3P39023 403 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 PIK3CBP42338 1070 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 MAGEA10P43363 369 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 OR1G1P47890 313 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 GSSP48637 474 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 TUFMP49411 452 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CLK1P49759 484 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 WNT3P56703 355 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 DEFA1P59665 94 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 DEFA3P59666 94 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 DCDC1P59894 354 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RHOAP61586 193 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 VBP1P61758 197 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 COPZ1P61923 177 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 NCS1P62166 190 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RPP38P78345 283 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 KCNJ10P78508 379 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 FCHO2Q0JRZ9 810 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 TWF1Q12792 350 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 SELENBP1Q13228 472 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 TAF1CQ15572 869 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 UGT8Q16880 541 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 INAVAQ3KP66 663 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 PAGE2BQ5JRK9 111 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 HABP4Q5JVS0 413 aaKnown RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 PERM1Q5SV97 790 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 MPP7Q5T2T1 576 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 ATAD3BQ5T9A4 648 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 ANXA8L1Q5VT79 327 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 FAM171A1Q5VUB5 890 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RNLSQ5VYX0 342 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RNF219Q5W0B1 726 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 FRG2Q64ET8 278 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 RETSATQ6NUM9 610 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 NOXRED1Q6NXP6 359 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 FUT10Q6P4F1 479 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 DOK6Q6PKX4 331 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 GDPGP1Q6ZNW5 385 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CCDC80Q76M96 950 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF551Q7Z340 670 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 AKAP14Q86UN6 197 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CCDC71Q8IV32 467 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 DENND1CQ8IV53 801 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 P3H2Q8IVL5 708 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 ENTHD1Q8IYW4 607 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 ABI1Q8IZP0 508 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 CFAP52Q8N1V2 620 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 C10orf111Q8N326 155 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 KRTCAP2Q8N6L1 136 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 IL17RCQ8NAC3 791 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 C11orf65Q8NCR3 313 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 TTC16Q8NEE8 873 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 GOT1L1Q8NHS2 421 aaPredicted RBP5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 LKAAEAR1Q8TD35 194 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 APH1BQ8WW43 257 aa5.08□□□□□ -1.6
TMEM55B-204ENST00000553602 SELENOMQ8WWX9 145 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms