RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PRRG2O14669 202 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 PSIP1O75475 530 aaKnown RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 CDC123O75794 336 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 CCNDBP1O95273 360 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 NSA2O95478 260 aaKnown RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SLC16A8O95907 504 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 IFNB1P01574 187 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SP1P08047 785 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 CYC1P08574 325 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ETS1P14921 441 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ZNF24P17028 368 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 HOXB4P17483 251 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 IGFBP2P18065 325 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ARNTP27540 789 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 NMBRP28336 390 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ATP5DP30049 168 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 FMO4P31512 558 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 PTGER1P34995 402 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 CYLC1P35663 651 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 FDFT1P37268 417 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 AGTR2P50052 363 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 PNLIPRP1P54315 467 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SESN2P58004 480 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 KCNJ11Q14654 390 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ARHGAP19Q14CB8 494 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 EXT1Q16394 746 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 MAPKAPK3Q16644 382 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 KLHL38Q2WGJ6 581 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SFT2D3Q587I9 215 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ACSBG2Q5FVE4 666 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ZNF468Q5VIY5 522 aaPredicted RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SLC25A25Q6KCM7 469 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 PAPD4Q6PIY7 484 aaKnown RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 VN1R4Q7Z5H5 301 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 CCDC170Q8IYT3 715 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 MPP5Q8N3R9 675 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 MARVELD2Q8N4S9 558 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 CPSF7Q8N684 471 aaKnown RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 SLC5A8Q8N695 610 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 OTUD6BQ8N6M0 293 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 M1APQ8TC57 530 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 ZNF480Q8WV37 535 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 LPGAT1Q92604 370 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 NRGNQ92686 78 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 TSLPQ969D9 159 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 LACRTQ9GZZ8 138 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 MMP25Q9NPA2 562 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 RAB6BQ9NRW1 208 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 UTP6Q9NYH9 597 aaKnown RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 COQ3Q9NZJ6 369 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 LRFN1Q9P244 771 aa8.55□□□□□ -1.04
SYNE2-209ENST00000553308 REXO2Q9Y3B8 237 aaKnown RBP8.55□□□□□ -1.04
SYNE2-209ENST00000553308 NKX2-6A6NCS4 301 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 FAM90A27PA6NNH2 459 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 GOLGA8KD6RF30 607 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 E7ENX8 843 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 GOLGA8TH3BQL2 631 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 H7BY64 318 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 LIASO43766 372 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 NME2P1O60361 137 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 RDH16O75452 317 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 SLC25A12O75746 678 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 FTCDO95954 541 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 CATP04040 527 aaKnown RBP8.54□□□□□ -1.04
SYNE2-209ENST00000553308 APRTP07741 180 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 NME2P22392 152 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 BCL6P41182 706 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 RHAGQ02094 409 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 TAP2Q03519 686 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 RELAQ04206 551 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 PTK6Q13882 451 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 USP10Q14694 798 aaKnown RBP8.54□□□□□ -1.04
SYNE2-209ENST00000553308 ABRAXAS2Q15018 415 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 OASLQ15646 514 aaKnown RBP8.54□□□□□ -1.04
SYNE2-209ENST00000553308 PCID2Q5JVF3 399 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 CES3Q6UWW8 571 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 CEP128Q6ZU80 1094 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 PEX26Q7Z412 305 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 CD163Q86VB7 1156 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 TMEM200AQ86VY9 491 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 EID3Q8N140 333 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 KIF2BQ8N4N8 673 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 UBL4BQ8N7F7 174 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 RNF214Q8ND24 703 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 ZCCHC10Q8TBK6 192 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 CCDC138Q96M89 665 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 PRAP1Q96NZ9 151 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 CDCP1Q9H5V8 836 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 FAM114A2Q9NRY5 505 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 TNFRSF10DQ9UBN6 386 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 AMFRQ9UKV5 643 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 CRYL1Q9Y2S2 319 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 TACC2O95359 2948 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 MTORP42345 2549 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 GTF3C1Q12789 2109 aa8.54□□□□□ -1.04
SYNE2-209ENST00000553308 HCFC1P51610 2035 aa8.53□□□□□ -1.04
SYNE2-209ENST00000553308 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
SYNE2-209ENST00000553308 ZNF860A6NHJ4 632 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms