RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 OC90Q02509 493 aaPredicted RBP13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 GBX1Q14549 363 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 OASLQ15646 514 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 KRTAP21-3Q3LHN1 58 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 THEMIS2Q5TEJ8 643 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 SPINK14Q6IE38 97 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 ANKRD37Q7Z713 158 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 AMER2Q8N7J2 671 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 OR51Q1Q8NH59 317 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 M1APQ8TC57 530 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 AGAP11Q8TF27 550 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 CA5BP1Q8WTZ4 195 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 LPGAT1Q92604 370 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 FAM136AQ96C01 138 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 FRMD6Q96NE9 622 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 PKP4Q99569 1192 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 HES7Q9BYE0 225 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 TRIM5Q9C035 493 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 ABCF3Q9NUQ8 709 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 BFARQ9NZS9 450 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 PAK5Q9P286 719 aa13.39□□□□□ -0.27
CHMP1A-210ENST00000551981 E5RI56 91 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 E9PLN8 166 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 SMAPO00193 183 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 SLC16A8O95907 504 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 FTCDO95954 541 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 NMBRP28336 390 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 NPY2RP49146 381 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 TAS2R50P59544 299 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 CRADDP78560 199 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 KLHL38Q2WGJ6 581 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 ACSBG2Q5FVE4 666 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 SIAH3Q8IW03 269 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 LGI4Q8N135 537 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 TXLNBQ8N3L3 684 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 PPFIBP2Q8ND30 876 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 ZNF480Q8WV37 535 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 TCF12Q99081 682 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 VKORC1Q9BQB6 163 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 ENKD1Q9H0I2 346 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 EIF2B3Q9NR50 452 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 COQ3Q9NZJ6 369 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 HCN3Q9P1Z3 774 aa13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 DRG1Q9Y295 367 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 REXO2Q9Y3B8 237 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-210ENST00000551981 NIPBLQ6KC79 2804 aaeCLIP13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 GABRR3A8MPY1 467 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 E7ENX8 843 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 CDK2AP1O14519 115 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 KIF5CO60282 957 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 VAPBO95292 243 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 SYF2O95926 243 aaKnown RBP13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 SP1P08047 785 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 ETS1P14921 441 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 CD1EP15812 388 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 ZNF24P17028 368 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 HRH2P25021 359 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 BCL6P41182 706 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 RPS15AP62244 130 aaKnown RBP13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 TAP2Q03519 686 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 ACTN3Q08043 901 aaPredicted RBP13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 TYSND1Q2T9J0 566 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 TTLL9Q3SXZ7 439 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 SEL1L2Q5TEA6 688 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 SLC25A25Q6KCM7 469 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 GALNTL5Q7Z4T8 443 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 PCGF5Q86SE9 256 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 DOLPP1Q86YN1 238 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 FBXO15Q8NCQ5 510 aaPredicted RBP13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 SDCCAG3Q96C92 435 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 LPAR4Q99677 370 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 TRIM51Q9BSJ1 452 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 ANKHQ9HCJ1 492 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 PPT2Q9UMR5 302 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 VPS9D1Q9Y2B5 631 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 CRYL1Q9Y2S2 319 aa13.37□□□□□ -0.27
CHMP1A-210ENST00000551981 SCN3AQ9NY46 2000 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 KCNE1BA0A087WTH5 132 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 H7BY64 318 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 STATHP02808 62 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 IL1RNP18510 177 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 ABRAXAS2Q15018 415 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 NSDHLQ15738 373 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 MAPKAPK3Q16644 382 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 SFT2D3Q587I9 215 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 PAPD4Q6PIY7 484 aaKnown RBP13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 NCCRP1Q6ZVX7 275 aaPredicted RBP13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 PRUNE1Q86TP1 453 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 REXO1L1PQ8IX06 675 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 ACBD4Q8NC06 268 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 ACRBPQ8NEB7 543 aa13.36□□□□□ -0.27
CHMP1A-210ENST00000551981 C1orf54Q8WWF1 131 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms