RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CYTH4Q9UIA0 394 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 PURGQ9UJV8 347 aaKnown RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 PNMA8BQ9ULN7 279 aaPredicted RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 USP18Q9UMW8 372 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 STUB1Q9UNE7 303 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 BTRCQ9Y297 605 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TMEM5Q9Y2B1 443 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TMX2Q9Y320 296 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 NPTNQ9Y639 398 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 PHLPP1O60346 1717 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 NAV1Q8NEY1 1877 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SHANK3Q9BYB0 1731 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 FOCADQ5VW36 1801 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 SBF2Q86WG5 1849 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 A0A1B0GWJ7 208 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 LRRC72A6NJI9 287 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 C2CD4BA6NLJ0 364 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 WASHC1A8K0Z3 465 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 H3BS24 57 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ACKR2O00590 384 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 UBFD1O14562 309 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 APOL1O14791 398 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 CHP2O43745 196 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 EIF1BO60739 113 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 PSIP1O75475 530 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 CLN5O75503 358 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 PDE9AO76083 593 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 IFNA7P01567 189 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 EPOP01588 193 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HMGCRP04035 888 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 DNTTP04053 509 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ADRB1P08588 477 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 SRCP12931 536 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HLA-EP13747 358 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 NCK1P16333 377 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 GABRB1P18505 474 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ITGALP20701 1170 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 RPS3P23396 243 aaKnown RBP eCLIP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 KLRK1P26718 216 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HOXA9P31269 272 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 FMO3P31513 532 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HIBADHP31937 336 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HNF1BP35680 557 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 EIF1P41567 113 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 MTHFRP42898 656 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 KCNJ5P48544 419 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 RGS6P49758 472 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 KCNQ1P51787 676 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 EPHA5P54756 1037 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 YWHAEP62258 255 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 UBXN2AP68543 259 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 PSPHP78330 225 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ABATP80404 500 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HOXC5Q00444 222 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 PUDPQ08623 228 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ADAM15Q13444 863 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ITPK1Q13572 414 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 EXOSC2Q13868 293 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 CAPRIN1Q14444 709 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 USP10Q14694 798 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 GRM7Q14831 915 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 QPRTQ15274 297 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 SMAD2Q15796 467 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ETFDHQ16134 617 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 TATDN3Q17R31 274 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 SMTNL2Q2TAL5 461 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 GAB4Q2WGN9 574 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 MTERF2Q49AM1 385 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 VPS26BQ4G0F5 336 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 FAM98BQ52LJ0 330 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ARMCX4Q5H9R4 360 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 RABL3Q5HYI8 236 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 TECRLQ5HYJ1 363 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 NHLRC3Q5JS37 347 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 PAGE3Q5JUK9 113 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 TEX30Q5JUR7 227 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 ARMC4Q5T2S8 1044 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 KCTD11Q693B1 232 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 OR7E24Q6IFN5 339 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 DENND1BQ6P3S1 775 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 TMEM270Q6UE05 265 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 PAMR1Q6UXH9 720 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC26A9Q7LBE3 791 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HSD17B13Q7Z5P4 300 aaPredicted RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 CUZD1Q86UP6 607 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HIPK1Q86Z02 1210 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 MFSD6LQ8IWD5 586 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 PHC2Q8IXK0 858 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 TIGD4Q8IY51 512 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 MIER2Q8N344 545 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 DCBLD1Q8N8Z6 715 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 UXS1Q8NBZ7 420 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 DCAF4Q8WV16 495 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC13A3Q8WWT9 602 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 L3HYPDHQ96EM0 354 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 VPS39Q96JC1 886 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 HRASLS5Q96KN8 279 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 RPL10LQ96L21 214 aaKnown RBP5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 C3orf30Q96M34 536 aa5.12□□□□□ -1.59
LSM3P2-201ENST00000551246 RNF145Q96MT1 663 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms