RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZNF148Q9UQR1 794 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 SCN3AQ9NY46 2000 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 CCDC168Q8NDH2 2452 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 ZFHX3Q15911 3703 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 IGHV3-20A0A0C4DH32 117 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 NPIPA5E9PKD4 350 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 E9PLN8 166 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 ADAM10O14672 748 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 PFDN6O15212 129 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 SEC24DO94855 1032 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 NSA2O95478 260 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 SLC16A8O95907 504 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 IFNB1P01574 187 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 CATP04040 527 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 SP1P08047 785 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 CHRM3P20309 590 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 HRH2P25021 359 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 ARNTP27540 789 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 NMBRP28336 390 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 EEF1DP29692 281 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 FMO4P31512 558 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 BCL6P41182 706 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 EIF3BP55884 814 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 MAT1AQ00266 395 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 OR1C1Q15619 314 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 TYSND1Q2T9J0 566 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 SKOR2Q2VWA4 1001 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 KLHL38Q2WGJ6 581 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 ACSBG2Q5FVE4 666 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 RNF187Q5TA31 235 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 SPINK14Q6IE38 97 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 MRNIPQ6NTE8 343 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 C4orf22Q6V702 233 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 LANCL3Q6ZV70 420 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 ANKRD37Q7Z713 158 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 CRLF3Q8IUI8 442 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 CEP97Q8IW35 865 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 CHERPQ8IWX8 916 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 LRRC56Q8IYG6 542 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 LGI4Q8N135 537 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 HORMAD2Q8N7B1 307 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 TMEM178AQ8NBL3 297 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 PLPP5Q8NEB5 264 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 OR9A4Q8NGU2 314 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 OR51Q1Q8NH59 317 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 ZNF480Q8WV37 535 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 ASB11Q8WXH4 323 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 ATG4AQ8WYN0 398 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 TM4SF19Q96DZ7 209 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 THAP11Q96EK4 314 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 FRMD6Q96NE9 622 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 DMRTA2Q96SC8 542 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 NPAS2Q99743 824 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 OLFM1Q99784 485 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 VKORC1Q9BQB6 163 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 TRIM51Q9BSJ1 452 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 KIFC1Q9BW19 673 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 TSPY26PQ9H489 355 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 KCNK13Q9HB14 408 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 EIF2B3Q9NR50 452 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 TMEM184CQ9NVA4 438 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 PAK5Q9P286 719 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 GALPQ9UBC7 116 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 TAC3Q9UHF0 121 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 PCYOX1Q9UHG3 505 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 NPIPA1Q9UND3 350 aa9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 PACSIN2Q9UNF0 486 aaPredicted RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 DRG1Q9Y295 367 aaKnown RBP9.29□□□□□ -0.92
TRAFD1-207ENST00000550051 HCFC1P51610 2035 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 FAM227AF5H4B4 570 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 H7BY64 318 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 GFYI3L273 518 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 P2RX6O15547 441 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 KIF5CO60282 957 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 NIPSNAP2O75323 286 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 NEURL1O76050 574 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 VAPBO95292 243 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 ETS1P14921 441 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 IL10P22301 178 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 RPL22P35268 128 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 SKIV2L2P42285 1042 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 SESN2P58004 480 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 SNRPNP63162 240 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 CSNK1G2P78368 415 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 CRADDP78560 199 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 TLE4Q04727 773 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 ARMC3Q5W041 872 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 FCRLBQ6BAA4 426 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 SLC25A25Q6KCM7 469 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 TMEM214Q6NUQ4 689 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 RAD9BQ6WBX8 426 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 CYHR1Q6ZMK1 362 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 PRUNE1Q86TP1 453 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 CDH24Q86UP0 819 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 EID3Q8N140 333 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 GHDCQ8N2G8 530 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 SLC5A8Q8N695 610 aa9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 FAM98AQ8NCA5 519 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-207ENST00000550051 MCOLN3Q8TDD5 553 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms