RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ACSL4O60488 711 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 PRAMEF1O95521 474 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 CPSF4O95639 269 aaKnown RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 MED22Q15528 200 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 TSTQ16762 297 aaKnown RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 C9orf131Q5VYM1 1079 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 GPR155Q7Z3F1 870 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 VN1R5Q7Z5H4 357 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 KRT73Q86Y46 540 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 UTP15Q8TED0 518 aaKnown RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 TSEN34Q9BSV6 310 aaKnown RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 SPATA9Q9BWV2 254 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 DUSP12Q9UNI6 340 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 AP1M2Q9Y6Q5 423 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 MAU2Q9Y6X3 613 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 FAM25AB3EWG3 89 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 FAM25CB3EWG5 89 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 FAM25GB3EWG6 89 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 NBNO60934 754 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 ACPPP15309 386 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 GPRC6AQ5T6X5 926 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 GRPEL2Q8TAA5 225 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 TRNT1Q96Q11 434 aaKnown RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 ABCG8Q9H221 673 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 CCSER2Q9H7U1 834 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 MS4A12Q9NXJ0 267 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 PAQR5Q9NXK6 330 aaPredicted RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 PADI3Q9ULW8 664 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 BOLA1Q9Y3E2 137 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 RHOCP08134 193 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 EPORP19235 508 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 MZF1P28698 734 aaPredicted RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 CD52P31358 61 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 RPS24P62847 133 aaKnown RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 DMC1Q14565 340 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 GGTA1PQ4G0N0 100 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 NOXRED1Q6NXP6 359 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 RNF130Q86XS8 419 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 TTC9BQ8N6N2 239 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 ATAD1Q8NBU5 361 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 EID2BQ96D98 161 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 DOHHQ9BU89 302 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 CDCA4Q9BXL8 241 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 ASB8Q9H765 288 aa22.34■■□□□ 1.17
NPAS3-206ENST00000548645 NUP214P35658 2090 aaPredicted RBP22.34■■□□□ 1.17
NPAS3-206ENST00000548645 MEIOCA2RUB1 952 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 EFCAB10A6NFE3 127 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 H3BNC9 293 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 RGS5O15539 181 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 AMD1P17707 334 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 RPS5P46782 204 aaKnown RBP22.33■■□□□ 1.17
NPAS3-206ENST00000548645 RFX2P48378 723 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 FAM189BP81408 668 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 BOP1Q14137 746 aaKnown RBP22.33■■□□□ 1.17
NPAS3-206ENST00000548645 SYT12Q8IV01 421 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 B3GNT7Q8NFL0 401 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 TTYH2Q9BSA4 534 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 CCM2Q9BSQ5 444 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 ROGDIQ9GZN7 287 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 ASAH2Q9NR71 780 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 TMEM184CQ9NVA4 438 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 FAM120CQ9NX05 1096 aaKnown RBP22.33■■□□□ 1.17
NPAS3-206ENST00000548645 PCDHB9Q9Y5E1 797 aa22.33■■□□□ 1.17
NPAS3-206ENST00000548645 KRT87PA6NCN2 255 aa22.33■■□□□ 1.16
NPAS3-206ENST00000548645 PTX3P26022 381 aaPredicted RBP22.33■■□□□ 1.16
NPAS3-206ENST00000548645 ATCAYQ86WG3 371 aa22.33■■□□□ 1.16
NPAS3-206ENST00000548645 GALNT6Q8NCL4 622 aa22.33■■□□□ 1.16
NPAS3-206ENST00000548645 CHTF18Q8WVB6 975 aa22.33■■□□□ 1.16
NPAS3-206ENST00000548645 OR5M11Q96RB7 305 aa22.33■■□□□ 1.16
NPAS3-206ENST00000548645 TPT1P8Q9HAU6 139 aa22.33■■□□□ 1.16
NPAS3-206ENST00000548645 PCDHB11Q9Y5F2 797 aa22.33■■□□□ 1.16
NPAS3-206ENST00000548645 NPIPB8E9PQR5 432 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 PRMT3O60678 531 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 SCN2BO60939 215 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 CLDN11O75508 207 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 PRIM2P49643 509 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 WNT3P56703 355 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 UGT8Q16880 541 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 ERAP2Q6P179 960 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 NCEH1Q6PIU2 408 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 SPPL2AQ8TCT8 520 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 VPS4AQ9UN37 437 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 TMA7Q9Y2S6 64 aaKnown RBP22.32■■□□□ 1.16
NPAS3-206ENST00000548645 PRAMEF12O95522 483 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 YES1P07947 543 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 COX7A2P14406 83 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 TP53BP2Q13625 1128 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 MCCC1Q96RQ3 725 aaPredicted RBP22.32■■□□□ 1.16
NPAS3-206ENST00000548645 ARL15Q9NXU5 204 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 TAS2R16Q9NYV7 291 aa22.32■■□□□ 1.16
NPAS3-206ENST00000548645 CYP7B1O75881 506 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 ITGALP20701 1170 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 CCDC58Q4VC31 144 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 SNAP47Q5SQN1 464 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 FZD4Q9ULV1 537 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 KCNE1BA0A087WTH5 132 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.31■■□□□ 1.16
NPAS3-206ENST00000548645 CCL15-CCL14A0A0B4J2E2 113 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 RPIAP49247 311 aa22.31■■□□□ 1.16
NPAS3-206ENST00000548645 SLC11A2P49281 568 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms