RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 ZNF778Q96MU6 729 aa15.95■□□□□ 0.14
VPS29-204ENST00000548259 KCNJ16Q9NPI9 418 aa15.95■□□□□ 0.14
VPS29-204ENST00000548259 TNFRSF10DQ9UBN6 386 aa15.95■□□□□ 0.14
VPS29-204ENST00000548259 KCNN3Q9UGI6 736 aa15.95■□□□□ 0.14
VPS29-204ENST00000548259 EDARQ9UNE0 448 aa15.95■□□□□ 0.14
VPS29-204ENST00000548259 NAV3Q8IVL0 2385 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 A0A0U1RQJ8 604 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 KRT87PA6NCN2 255 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 MYO1CO00159 1063 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 TFECO14948 347 aaPredicted RBP15.94■□□□□ 0.14
VPS29-204ENST00000548259 FAM155BO75949 473 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 TPOP07202 933 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 IL10P22301 178 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 HRH2P25021 359 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 GDF10P55107 478 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 NSDHLQ15738 373 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 RNF187Q5TA31 235 aaPredicted RBP15.94■□□□□ 0.14
VPS29-204ENST00000548259 MRNIPQ6NTE8 343 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 PAPD4Q6PIY7 484 aaKnown RBP15.94■□□□□ 0.14
VPS29-204ENST00000548259 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
VPS29-204ENST00000548259 ARHGEF39Q8N4T4 335 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 RND1Q92730 232 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 ANKHQ9HCJ1 492 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 TSR3Q9UJK0 312 aaKnown RBP15.94■□□□□ 0.14
VPS29-204ENST00000548259 SPG11Q96JI7 2443 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 CACNA1CQ13936 2221 aa15.94■□□□□ 0.14
VPS29-204ENST00000548259 CPAMD8Q8IZJ3 1885 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 IGKV1-8A0A0C4DH67 115 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 SMAPO00193 183 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 AP3B1O00203 1094 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 ADAM10O14672 748 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 KIF5CO60282 957 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 NME2P1O60361 137 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 PRMT3O60678 531 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 NEURL1O76050 574 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 ZWINTO95229 277 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 IGFBP2P18065 325 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 CHRM3P20309 590 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 NME2P22392 152 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 CYB561P49447 251 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 HSF1Q00613 529 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 SFT2D3Q587I9 215 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 PCID2Q5JVF3 399 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 AADACL2Q6P093 401 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 CEP128Q6ZU80 1094 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 PCGF5Q86SE9 256 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 RPS19BP1Q86WX3 136 aaKnown RBP15.93■□□□□ 0.14
VPS29-204ENST00000548259 CLYBLQ8N0X4 340 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 LILRB4Q8NHJ6 448 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 SLC35B2Q8TB61 432 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 FAM57AQ8TBR7 257 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 ALG3Q92685 438 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 TMUB1Q9BVT8 246 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 FAM129AQ9BZQ8 928 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 CDCP1Q9H5V8 836 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 ETNK1Q9HBU6 452 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 ABCF3Q9NUQ8 709 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 MARCH4Q9P2E8 410 aaPredicted RBP15.93■□□□□ 0.14
VPS29-204ENST00000548259 KLF13Q9Y2Y9 288 aaPredicted RBP15.93■□□□□ 0.14
VPS29-204ENST00000548259 ASB1Q9Y576 335 aa15.93■□□□□ 0.14
VPS29-204ENST00000548259 ARHGEF33A8MVX0 844 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 E5RI56 91 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 HAT1O14929 419 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 P2RX6O15547 441 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 IFNB1P01574 187 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 ESR1P03372 595 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 APRTP07741 180 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 BCL6P41182 706 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 RPS15AP62244 130 aaKnown RBP15.92■□□□□ 0.14
VPS29-204ENST00000548259 SKP1P63208 163 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 FOLH1Q04609 750 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 MYBPHQ13203 477 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 ABRAXAS2Q15018 415 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 TTLL9Q3SXZ7 439 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 CD163Q86VB7 1156 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.92■□□□□ 0.14
VPS29-204ENST00000548259 CAMKVQ8NCB2 501 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 MYRIPQ8NFW9 859 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 THAP11Q96EK4 314 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 TP63Q9H3D4 680 aaPredicted RBP15.92■□□□□ 0.14
VPS29-204ENST00000548259 CHRAC1Q9NRG0 131 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 RAB6BQ9NRW1 208 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 HCN3Q9P1Z3 774 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 AMFRQ9UKV5 643 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 TFR2Q9UP52 801 aa15.92■□□□□ 0.14
VPS29-204ENST00000548259 R3HDM2Q9Y2K5 976 aaKnown RBP15.92■□□□□ 0.14
VPS29-204ENST00000548259 MIF4GDA9UHW6 222 aaKnown RBP15.91■□□□□ 0.14
VPS29-204ENST00000548259 KLRC4-KLRK1H3BQV0 150 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 FCHO1O14526 889 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 PSIP1O75475 530 aaKnown RBP15.91■□□□□ 0.14
VPS29-204ENST00000548259 SYF2O95926 243 aaKnown RBP15.91■□□□□ 0.14
VPS29-204ENST00000548259 DRD2P14416 443 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 FMO4P31512 558 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 DNAJA1P31689 397 aaKnown RBP15.91■□□□□ 0.14
VPS29-204ENST00000548259 EFNA3P52797 238 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 OR4D2P58180 307 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 KLHL38Q2WGJ6 581 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.91■□□□□ 0.14
VPS29-204ENST00000548259 ACAD11Q709F0 780 aa15.91■□□□□ 0.14
VPS29-204ENST00000548259 PEX26Q7Z412 305 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms