RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TMEM151BQ8IW70 566 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 MFSD9Q8NBP5 474 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 PDPRQ8NCN5 879 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 ZNF740Q8NDX6 193 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 OR2Y1Q8NGV0 311 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 COL26A1Q96A83 441 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 ESAMQ96AP7 390 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 TM4SF19Q96DZ7 209 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 ATOH8Q96SQ7 321 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 SARGQ9BW04 601 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 SLC26A1Q9H2B4 701 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 SPNS1Q9H2V7 528 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 PELI2Q9HAT8 420 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 PTBP2Q9UKA9 531 aaKnown RBP17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 MAN2B2Q9Y2E5 1009 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 TRBC2A0A5B9 178 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 EIF4E1BA6NMX2 242 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 OR1F1O43749 312 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 KERAO60938 352 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 KRT38O76015 456 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 KLHL2O95198 593 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 S100BP04271 92 aaPredicted RBP17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 PRB1P04280 392 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 FOLR3P41439 243 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 HSPA7P48741 367 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 SNRPNP63162 240 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 SSPNQ14714 243 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 NKG7Q16617 165 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 FAM83EQ2M2I3 478 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 NXPE4Q6UWF7 544 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 TAOK1Q7L7X3 1001 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 TMPRSS11BQ86T26 416 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 ASPGQ86U10 573 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 CAMKVQ8NCB2 501 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 SLC13A3Q8WWT9 602 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 ISL2Q96A47 359 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 MVB12AQ96EY5 273 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 VPS11Q9H270 941 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 EPB41L4BQ9H329 900 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 CNOT10Q9H9A5 744 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 CTSFQ9UBX1 484 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 CDC14AQ9UNH5 594 aa17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 MRPS2Q9Y399 296 aaKnown RBP17.82■□□□□ 0.44
PRPF40B-206ENST00000547764 A0A0A6YYC8 382 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 ESPNB1AK53 854 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 SUPT3HB4E1H0 165 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 I3L1I5 382 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 UBXN8O00124 270 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 FOXS1O43638 330 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 SUPT3HO75486 399 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 STK16O75716 305 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 IPO13O94829 963 aaKnown RBP17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 UMODP07911 640 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 GNAZP19086 355 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 CNTFP26441 200 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 GCAP28676 217 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 TNFRSF8P28908 595 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 OTX2P32243 289 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 MAGEA12P43365 314 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 GLRBP48167 497 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 REEP5Q00765 189 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 CDC16Q13042 620 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 FAM53BQ14153 422 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 SLC29A2Q14542 456 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 NDUFA9Q16795 377 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 TBC1D19Q8N5T2 526 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 RHEBL1Q8TAI7 183 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 MMABQ96EY8 250 aaPredicted RBP17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 GPR78Q96P69 363 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 SPSB2Q99619 263 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 DRC3Q9H069 523 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 ANKZF1Q9H8Y5 726 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 WDR54Q9H977 334 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 DNAJC11Q9NVH1 559 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 GEMIN8Q9NWZ8 242 aaKnown RBP17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 NUDT4Q9NZJ9 180 aa17.81■□□□□ 0.44
PRPF40B-206ENST00000547764 VSTM2BA6NLU5 285 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 TRIM49D1C9J1S8 452 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 MTHFD2P13995 350 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 FBLP22087 321 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 VARSP26640 1264 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 SCTRP47872 440 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 KCNAB2Q13303 367 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 DSG2Q14126 1118 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 ACAP2Q15057 778 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 TMEM214Q6NUQ4 689 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 SLCO4C1Q6ZQN7 724 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 RAB43Q86YS6 212 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 PLD6Q8N2A8 252 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 KCT2Q8NC54 265 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 MOCOSQ96EN8 888 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 AIF1LQ9BQI0 150 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 CAPS2Q9BXY5 557 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 ADNPQ9H2P0 1102 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 GPRC5BQ9NZH0 403 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 ZNF282Q9UDV7 671 aaPredicted RBP17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 NXT1Q9UKK6 140 aaKnown RBP17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 ASB1Q9Y576 335 aa17.8■□□□□ 0.44
PRPF40B-206ENST00000547764 CCDC189A1A4V9 331 aa17.79■□□□□ 0.44
PRPF40B-206ENST00000547764 ARGFXA6NJG6 315 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms