RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ZFATQ9P243 1243 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 C19orf25Q9UFG5 118 aaPredicted RBP8.88□□□□□ -0.99
YBX3-218ENST00000546298 TEKT2Q9UIF3 430 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 ADAMTS6Q9UKP5 1117 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 CHMP2BQ9UQN3 213 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 SLC22A7Q9Y694 548 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 ATMQ13315 3056 aa8.88□□□□□ -0.99
YBX3-218ENST00000546298 RP1L1Q8IWN7 2480 aaPredicted RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 IGHV1-45A0A0A0MS14 117 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 TRAV17A0A0B4J275 112 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 EFCAB8A8MWE9 144 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 FFAR3O14843 346 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 GPR42O15529 346 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 SEMA7AO75326 666 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 BANF1O75531 89 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 KLHL18O94889 574 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 SLC35G6P0C7Q6 338 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 CDH1P12830 882 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 BCL6P41182 706 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 ITGA8P53708 1063 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 MAT1AQ00266 395 aaKnown RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 TIAL1Q01085 375 aaKnown RBP eCLIP8.87□□□□□ -0.99
YBX3-218ENST00000546298 EEF1A2Q05639 463 aaKnown RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 PHKG1Q16816 387 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 MINDY4Q4G0A6 757 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 HP1BP3Q5SSJ5 553 aaPredicted RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 MFSD4BQ5TF39 518 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 STEAP4Q687X5 459 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 FAAH2Q6GMR7 532 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 TMEM214Q6NUQ4 689 aaKnown RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 RPUSD3Q6P087 351 aaKnown RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 TMEM205Q6UW68 189 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 FAM180AQ6UWF9 173 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 VN1R4Q7Z5H5 301 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 IGDCC3Q8IVU1 814 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 NKAPQ8N5F7 415 aaKnown RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 MFSD9Q8NBP5 474 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 ST6GALNAC3Q8NDV1 305 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 ABHD11Q8NFV4 315 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 OR1N1Q8NGS0 311 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 OR9A4Q8NGU2 314 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 OR56A3Q8NH54 315 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 FAR1Q8WVX9 515 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 ANKRD7Q92527 254 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 HAS2Q92819 552 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 FBXL8Q96CD0 374 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 SNF8Q96H20 258 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 PDLIM5Q96HC4 596 aaKnown RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 VPS39Q96JC1 886 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 ZNF700Q9H0M5 742 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 KCNF1Q9H3M0 494 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 SYNPO2LQ9H987 977 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 NSMCE4AQ9NXX6 385 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 PTGFRNQ9P2B2 879 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 SLC5A6Q9Y289 635 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 MRPS2Q9Y399 296 aaKnown RBP8.87□□□□□ -0.99
YBX3-218ENST00000546298 MED13Q9UHV7 2174 aa8.87□□□□□ -0.99
YBX3-218ENST00000546298 TRBC2A0A5B9 178 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 SEC31AO94979 1220 aaKnown RBP8.86□□□□□ -0.99
YBX3-218ENST00000546298 TSPAN12O95859 305 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 NPPBP16860 134 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 IL1RNP18510 177 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 SOX11P35716 441 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 XCR1P46094 333 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 AGTR2P50052 363 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 PDIA2Q13087 525 aaKnown RBP8.86□□□□□ -0.99
YBX3-218ENST00000546298 PWP1Q13610 501 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 CSHL1Q14406 222 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 HERC3Q15034 1050 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 INAQ16352 499 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 SYT16Q17RD7 645 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 C4orf17Q53FE4 359 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 ABHD17BQ5VST6 288 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 TRMT10BQ6PF06 316 aaKnown RBP8.86□□□□□ -0.99
YBX3-218ENST00000546298 MBOAT1Q6ZNC8 495 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 CPEB2Q7Z5Q1 589 aaKnown RBP8.86□□□□□ -0.99
YBX3-218ENST00000546298 SLC26A11Q86WA9 606 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 SPNS2Q8IVW8 549 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 BCORP1Q8N888 145 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 OR51Q1Q8NH59 317 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 SUN3Q8TAQ9 357 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 ZCCHC10Q8TBK6 192 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 BRIX1Q8TDN6 353 aaKnown RBP8.86□□□□□ -0.99
YBX3-218ENST00000546298 GRHL3Q8TE85 626 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 TM4SF19Q96DZ7 209 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 IMMP1LQ96LU5 166 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 C5orf34Q96MH7 638 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 CYTH2Q99418 400 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 SARGQ9BW04 601 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 TRIM31Q9BZY9 425 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 VN1R1Q9GZP7 353 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 RNF32Q9H0A6 362 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.86□□□□□ -0.99
YBX3-218ENST00000546298 CLK4Q9HAZ1 481 aaKnown RBP8.86□□□□□ -0.99
YBX3-218ENST00000546298 PLEKHB1Q9UF11 243 aaPredicted RBP8.86□□□□□ -0.99
YBX3-218ENST00000546298 DYRK1BQ9Y463 629 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 CSAG2Q9Y5P2 127 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 TEX264Q9Y6I9 313 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 KCNE2Q9Y6J6 123 aa8.86□□□□□ -0.99
YBX3-218ENST00000546298 FEZF1A0PJY2 475 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms