RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NXNL1Q96CM4 212 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 CNRIP1Q96F85 164 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 PDLIM5Q96HC4 596 aaKnown RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 FAM218AQ96MZ4 157 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 BARD1Q99728 777 aaKnown RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 TREX2Q9BQ50 279 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ZNF577Q9BSK1 485 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 TEX12Q9BXU0 123 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 NYXQ9GZU5 481 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ZHX3Q9H4I2 956 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 MYNNQ9NPC7 610 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 STK26Q9P289 416 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ADD3Q9UEY8 706 aaKnown RBP3.75□□□□□ -1.81
SNHG1-224ENST00000545688 HFM1A2PYH4 1435 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 ANKRD50Q9ULJ7 1429 aa3.75□□□□□ -1.81
SNHG1-224ENST00000545688 USP32Q8NFA0 1604 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 FSD2A1L4K1 749 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 SAT1P21673 171 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 IL4RP24394 825 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 PDHA2P29803 388 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 SOX3P41225 446 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 ATRXP46100 2492 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 IRX4P78413 519 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 KLC1Q07866 573 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 HSPB3Q12988 150 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 CHAF1BQ13112 559 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 TAB1Q15750 504 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 NTRK2Q16620 822 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 MFSD12Q6NUT3 480 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 C4orf50Q6ZRC1 276 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 OR10Q1Q8NGQ4 319 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 LGMNQ99538 433 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 SEPHS2Q99611 448 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 OVOL2Q9BRP0 275 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 PANK2Q9BZ23 570 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 MTMR12Q9C0I1 747 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 HOXD1Q9GZZ0 328 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 CRNNQ9UBG3 495 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-224ENST00000545688 CTSZQ9UBR2 303 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 TBC1D29Q9UFV1 150 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 VPS28Q9UK41 221 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 THSD7AQ9UPZ6 1657 aa3.74□□□□□ -1.81
SNHG1-224ENST00000545688 LRPPRCP42704 1394 aaKnown RBP3.74□□□□□ -1.81
SNHG1-224ENST00000545688 IQGAP3Q86VI3 1631 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 TNS1Q9HBL0 1735 aaKnown RBP3.73□□□□□ -1.81
SNHG1-224ENST00000545688 NWD2Q9ULI1 1742 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 CDC42BPGQ6DT37 1551 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 TECPR2O15040 1411 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 PCNTO95613 3336 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 SHISA7A6NL88 538 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 A8MXK9 166 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 O00370 1275 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 IPO8O15397 1037 aaKnown RBP3.73□□□□□ -1.81
SNHG1-224ENST00000545688 IGKV3-15P01624 115 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 PRKAR1AP10644 381 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 GP1BBP13224 206 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 FOLR2P14207 255 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 PTGER4P35408 488 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 DNA2P51530 1060 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 CD300CQ08708 224 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 EPS8Q12929 822 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 TMEM132DQ14C87 1099 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 SNAPC1Q16533 368 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 MCMDC2Q4G0Z9 681 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 CBWD6Q4V339 395 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 HIGD2BQ4VC39 106 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 CBWD3Q5JTY5 395 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 FAM205BPQ63HN1 556 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 ZFAND4Q86XD8 727 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 KLHDC1Q8N7A1 406 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 CALML4Q96GE6 196 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 GOLPH3LQ9H4A5 285 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 GIMAP4Q9NUV9 329 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 WDR83OSQ9Y284 106 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 RREB1Q92766 1687 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 SBNO1A3KN83 1393 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 MAP3K5Q99683 1374 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 RGPD1P0DJD0 1748 aa3.73□□□□□ -1.81
SNHG1-224ENST00000545688 CROCC2H7BZ55 1655 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 CCDC144AA2RUR9 1427 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 RRBP1Q9P2E9 1410 aaKnown RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 NEXMIFQ5QGS0 1516 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 TRBV5-5A0A0J9YX44 114 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 hCG_1807616A0A1W2PRN6 198 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 A8MV72 311 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 TFECO14948 347 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 CEACAM4O75871 244 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 TSPAN9O75954 239 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 HOXD4P09016 255 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 PFKFB1P16118 471 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 CD27P26842 260 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 CDC25CP30307 473 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 OXTRP30559 389 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 ETV5P41161 510 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 MTHFRP42898 656 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 NAP1L1P55209 391 aaKnown RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 MYL7Q01449 175 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 ITGA7Q13683 1181 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 WTAPQ15007 396 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms