RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SERPINB6P35237 376 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 CDX1P47902 265 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 NT5C2P49902 561 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 STARD6P59095 220 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 DSC1Q08554 894 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 DMPKQ09013 629 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 SMC1AQ14683 1233 aaKnown RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 KIR2DS5Q14953 304 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 UGT3A2Q3SY77 523 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 SPDYCQ5MJ68 293 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 SIAH3Q8IW03 269 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 C4orf19Q8IY42 314 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 RTL3Q8N8U3 475 aaKnown RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 NCOA7Q8NI08 942 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 OLIG1Q8TAK6 271 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 RNASE8Q8TDE3 154 aaKnown RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TMED6Q8WW62 240 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TBC1D31Q96DN5 1066 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 P2RY12Q9H244 342 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 IL25Q9H293 177 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TNMDQ9H2S6 317 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 PELI2Q9HAT8 420 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 ZNF701Q9NV72 531 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-222ENST00000545308 DNAJC11Q9NVH1 559 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 HIF1ANQ9NWT6 349 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TXNDC16Q9P2K2 825 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TRPC4Q9UBN4 977 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 FBXL5Q9UKA1 691 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 MYO6Q9UM54 1294 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 GPR132Q9UNW8 380 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 DLGAP4Q9Y2H0 992 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 JRKLQ9Y4A0 524 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TEX264Q9Y6I9 313 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 TTC3P53804 2025 aa3.82□□□□□ -1.8
SNHG1-222ENST00000545308 CACNA1SQ13698 1873 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 COL5A3P25940 1745 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 MEGF6O75095 1541 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 IGLV5-37A0A075B6J1 123 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 A0A0G2JPF8 293 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 CTAGE9A4FU28 777 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 HNRNPCL3B7ZW38 293 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 KBTBD13C9JR72 458 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 E9PI62 339 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 H0YIG0 161 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 H3BNX3 289 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 GAPDHSO14556 408 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 SEC22BO75396 215 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 LUC7L3O95232 432 aaKnown RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 CTAGE8P0CG41 777 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 HNRNPCL4P0DMR1 293 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 PCP11498 1178 aaKnown RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 GAP43P17677 238 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 GNL1P36915 607 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 THOP1P52888 689 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 UCP2P55851 309 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 LINC00205P59089 165 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 CX3CL1P78423 397 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 DLG1Q12959 904 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 FUT11Q495W5 492 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 DNAJC21Q5F1R6 531 aaKnown RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 ELFN2Q5R3F8 820 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 PRAMEF8Q5VWM4 474 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 FAM166AQ6J272 317 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 C11orf63Q6NUN7 778 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 FAM171BQ6P995 826 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 PLEKHM3Q6ZWE6 761 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 ANKRD33Q7Z3H0 272 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 ADHFE1Q8IWW8 467 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 CTAGE4Q8IX94 777 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 AQP12AQ8IXF9 295 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 PELI3Q8N2H9 469 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 RASGEF1AQ8N9B8 481 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 OR11H4Q8NGC9 324 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 IRGQQ8WZA9 623 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 THOC1Q96FV9 657 aaKnown RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 FAM71F1Q96KD3 344 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 FAM20AQ96MK3 541 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 PANX3Q96QZ0 392 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 NEURL2Q9BR09 285 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 SF3B5Q9BWJ5 86 aaKnown RBP3.81□□□□□ -1.8
SNHG1-222ENST00000545308 TM6SF1Q9BZW5 370 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 SNX25Q9H3E2 840 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 GAREM1Q9H706 876 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 GKN1Q9NS71 199 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 TMEM161AQ9NX61 479 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 SPG21Q9NZD8 308 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 DAPK2Q9UIK4 370 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 FBXW2Q9UKT8 454 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 NRXN2Q9P2S2 1712 aa3.81□□□□□ -1.8
SNHG1-222ENST00000545308 RAB3GAP2Q9H2M9 1393 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 SLX4Q8IY92 1834 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 TRAV24A0A0B4J272 114 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 PLOD2O00469 737 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 GLCEO94923 617 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 SLC4A1P02730 911 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 HOXC6P09630 235 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 C8orf89P0DMQ9 161 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 EPORP19235 508 aa3.8□□□□□ -1.8
SNHG1-222ENST00000545308 TYMPP19971 482 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms