RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SLC12A1Q13621 1099 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 PTK6Q13882 451 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 SLC1A5Q15758 541 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 TOMM34Q15785 309 aaPredicted RBP8.64□□□□□ -1.03
VPS13D-212ENST00000543766 FLYWCH1Q4VC44 716 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 CES4AQ5XG92 561 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 CNKSR3Q6P9H4 555 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 AFTPHQ6ULP2 937 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 MFSD7Q6UXD7 560 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 KATNAL2Q8IYT4 538 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 DEDD2Q8WXF8 326 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 MISP3Q96FF7 219 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 SERPINB11Q96P15 392 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 NUDT9Q9BW91 350 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF696Q9H7X3 374 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 TRAF6Q9Y4K3 522 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 HSPB11Q9Y547 144 aa8.64□□□□□ -1.03
VPS13D-212ENST00000543766 RIC1Q4ADV7 1423 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 RFPL4AA6NLU0 287 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 GSG1L2A8MUP6 293 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 RFPL4AL1F8VTS6 287 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ATE1O95260 518 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ZBTB7AO95365 584 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 FBP1P09467 338 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CYP2C8P10632 490 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 TACR3P29371 465 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CLCNKBP51801 687 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 VSX2P58304 361 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MRPS22P82650 360 aaKnown RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CNN3Q15417 329 aaKnown RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MEP1AQ16819 746 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CERCAMQ5T4B2 595 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF470Q6ECI4 717 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 SLC25A25Q6KCM7 469 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 AP3S1Q92572 193 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 KCNJ9Q92806 393 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 PANX3Q96QZ0 392 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 TRIM56Q9BRZ2 755 aaKnown RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 RAB33BQ9H082 229 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 VCX2Q9H322 139 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CDC42EP4Q9H3Q1 356 aaKnown RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MID1IP1Q9NPA3 183 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 TMEM216Q9P0N5 145 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 SIX4Q9UIU6 781 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ZFP69BQ9UJL9 534 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 AP4S1Q9Y587 144 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 PCDHA11Q9Y5I1 949 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ZMYM2Q9UBW7 1377 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ANKRD63C9JTQ0 380 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CA12O43570 354 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 DPM1O60762 260 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CSH1P0DML2 217 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CSH2P0DML3 217 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CDH13P55290 713 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 STXBP1P61764 594 aaKnown RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 SRSF5Q13243 272 aaKnown RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 DDR2Q16832 855 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 EXOC3L4Q17RC7 722 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ACAD10Q6JQN1 1059 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ACSM5Q6NUN0 579 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CERS6Q6ZMG9 384 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF571Q7Z3V5 609 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 NLRX1Q86UT6 975 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 DDIASQ8IXT1 998 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 OR5D18Q8NGL1 313 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CSGALNACT1Q8TDX6 532 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CACNG8Q8WXS5 425 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 KLHDC3Q9BQ90 382 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CACNA2D2Q9NY47 1150 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 PHF11Q9UIL8 331 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 KCNIP3Q9Y2W7 256 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 DUOX1Q9NRD9 1551 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 TCRBV5S4A2TA0A5A2 114 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 TRIM49D1C9J1S8 452 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ADAMTS3O15072 1205 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 VEGFAP15692 232 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 CPT2P23786 658 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 PPP2R1BP30154 601 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 SIM1P81133 766 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 LCP2Q13094 533 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 DGKZQ13574 1117 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 COLEC12Q5KU26 742 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MANEALQ5VSG8 457 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ARCQ7LC44 396 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ZC3H3Q8IXZ2 948 aaKnown RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF383Q8NA42 475 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 BHLHE23Q8NDY6 225 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 DPF1Q92782 380 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 NTAN1Q96AB6 310 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 FAF2Q96CS3 445 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 MCCC1Q96RQ3 725 aaPredicted RBP8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ATP6V0BQ99437 205 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 PHB2Q99623 299 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 RBBP8Q99708 897 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 ADGRE3Q9BY15 652 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 BRF2Q9HAW0 419 aa8.63□□□□□ -1.03
VPS13D-212ENST00000543766 SEPSECSQ9HD40 501 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms