RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 CD22P20273 847 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 LSP1P33241 339 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 AHRP35869 848 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 ACY1Q03154 408 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 ZNF33BQ06732 778 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 RGS1Q08116 209 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 E2F2Q14209 437 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 DEFB110Q30KQ9 67 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 SGO1Q5FBB7 561 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 CES4AQ5XG92 561 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 KANK2Q63ZY3 851 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 DHRS13Q6UX07 377 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 PLD3Q8IV08 490 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDB1-223ENST00000543658 LAS2Q8IYD9 372 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 MFSD9Q8NBP5 474 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 CAMKVQ8NCB2 501 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 RCBTB1Q8NDN9 531 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 OR7G3Q8NG95 312 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 MTFMTQ96DP5 389 aaKnown RBP11.39□□□□□ -0.59
DDB1-223ENST00000543658 SEC16BQ96JE7 1060 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 C20orf27Q9GZN8 174 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 SPNS1Q9H2V7 528 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 ZNF395Q9H8N7 513 aaPredicted RBP11.39□□□□□ -0.59
DDB1-223ENST00000543658 FGFR1OP2Q9NVK5 253 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 RIC8BQ9NVN3 520 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 NMRK1Q9NWW6 199 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 ZFP69BQ9UJL9 534 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 HAO1Q9UJM8 370 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 ZNF225Q9UK10 706 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 ADAM21Q9UKJ8 722 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 ZNF490Q9ULM2 529 aaPredicted RBP11.39□□□□□ -0.59
DDB1-223ENST00000543658 PLCL2Q9UPR0 1127 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 BTRCQ9Y297 605 aa11.39□□□□□ -0.59
DDB1-223ENST00000543658 PTPRBP23467 1997 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 FRYLO94915 3013 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 KCNE1BA0A087WTH5 132 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 A0A1B0GTL3 188 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 TMEM233B4DJY2 109 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 TMEM150CB9EJG8 249 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SLC28A1O00337 649 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 MANBAO00462 879 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 TXNDC9O14530 226 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 HDAC3O15379 428 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 NDUFS4O43181 175 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 RGS14O43566 566 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 NRP2O60462 931 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 PRAMEF4O60810 478 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 MT-CO3P00414 261 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 PDYNP01213 254 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 EIF2S1P05198 315 aaKnown RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 HSD3B1P14060 373 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 NELFEP18615 380 aaKnown RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 HSD3B2P26439 372 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SERPINB3P29508 390 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 ARRB2P32121 409 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 CCKBRP32239 447 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 BCL6P41182 706 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SCTRP47872 440 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 RAP1GDS1P52306 607 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 FOXA1P55317 472 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 VSX2P58304 361 aaPredicted RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 STXBP1P61764 594 aaKnown RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 INSM1Q01101 510 aaPredicted RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 RELAQ04206 551 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 FOXM1Q08050 763 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 CSTF3Q12996 717 aaKnown RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 ZIC1Q15915 447 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 TCTE1Q5JU00 501 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 HES3Q5TGS1 186 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 PRAMEF9Q5VWM5 478 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 ZNF574Q6ZN55 896 aaPredicted RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 TMPRSS9Q7Z410 1059 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 ARHGAP22Q7Z5H3 698 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 CPLX4Q7Z7G2 160 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 ASPGQ86U10 573 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SLITRK4Q8IW52 837 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 LRRC34Q8IZ02 419 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 GPR135Q8IZ08 494 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 D2HGDHQ8N465 521 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 TTC29Q8NA56 475 aaPredicted RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 AGBL5Q8NDL9 886 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 ZNF740Q8NDX6 193 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 HUS1BQ8NHY5 278 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SLC13A3Q8WWT9 602 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 KLHL6Q8WZ60 621 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SLC41A2Q96JW4 573 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 MTERF1Q99551 399 aaKnown RBP11.38□□□□□ -0.59
DDB1-223ENST00000543658 CMKLR1Q99788 373 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 CCT7Q99832 543 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SIKE1Q9BRV8 207 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SARGQ9BW04 601 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SLC7A5P2Q9GIP4 190 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 CHRNA10Q9GZZ6 450 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 FAM107BQ9H098 131 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 PNPOQ9NVS9 261 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 SEMA5BQ9P283 1151 aa11.38□□□□□ -0.59
DDB1-223ENST00000543658 PDP2Q9P2J9 529 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms