RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 MC2RQ01718 297 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 RELAQ04206 551 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 IFT88Q13099 833 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 TRAF3Q13114 568 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 ZRSR2Q15696 482 aaKnown RBP9.72□□□□□ -0.85
CPSF7-221ENST00000543545 WASHC2DQ5SRD0 308 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 TMEM164Q5U3C3 297 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 PRAMEF9Q5VWM5 478 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 FRMPD2BQ6IN97 320 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 LETMD1Q6P1Q0 360 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 RNF44Q7L0R7 432 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 ASPGQ86U10 573 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 CUZD1Q86UP6 607 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 PPP1R3BQ86XI6 285 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 OR4N4Q8N0Y3 316 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 CSNK1A1LQ8N752 337 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 L3MBTL4Q8NA19 623 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 CAMKVQ8NCB2 501 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 TTLQ8NG68 377 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 AGR3Q8TD06 166 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 LRRC8CQ8TDW0 803 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 AGAP11Q8TF27 550 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 SLC13A3Q8WWT9 602 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 ZNF75CPQ92670 426 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-221ENST00000543545 RNF31Q96EP0 1072 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 WDR34Q96EX3 536 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 MACROD1Q9BQ69 325 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 PITHD1Q9GZP4 211 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-221ENST00000543545 CHRNA10Q9GZZ6 450 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 SPRTNQ9H040 489 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-221ENST00000543545 ELOVL6Q9H5J4 265 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 NT5DC2Q9H857 520 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 STARD5Q9NSY2 213 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 PILRAQ9UKJ1 303 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 SNX6Q9UNH7 406 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 SATB2Q9UPW6 733 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 FIS1Q9Y3D6 152 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 PCDHGA11Q9Y5H2 935 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 RP1P56715 2156 aa9.72□□□□□ -0.85
CPSF7-221ENST00000543545 COL5A1P20908 1838 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-221ENST00000543545 KCNE1BA0A087WTH5 132 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 A0A1B0GTL3 188 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TXNDC9O14530 226 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 UBFD1O14562 309 aaKnown RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 NDUFS4O43181 175 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 HCRTR1O43613 425 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ITM2AO43736 263 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 LYPLA1O75608 230 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TNFSF15O95150 251 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 KRT6AP02538 564 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 KRT6BP04259 564 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ENO1P06733 434 aaKnown RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 CAPN1P07384 714 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 CHRNGP07510 517 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ATXN8OSP0DMR3 200 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 RBMS1P29558 406 aaKnown RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 AHRP35869 848 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 KRT6CP48668 564 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 NEK2P51955 445 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ITGA1P56199 1179 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 GABREP78334 506 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 RGS1Q08116 209 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 BST1Q10588 318 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 IL11RAQ14626 422 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TCTE1Q5JU00 501 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 SH2D4BQ5SQS7 431 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 DCAF12Q5T6F0 453 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 BPHLQ86WA6 291 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TMEM126BQ8IUX1 230 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 LSMEM2Q8N112 164 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ZNF655Q8N720 491 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TTC29Q8NA56 475 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TRPV3Q8NET8 790 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 OR7G3Q8NG95 312 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 OR8K5Q8NH50 307 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 OR1L3Q8NH93 324 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 RAB3IL1Q8TBN0 382 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 SELENOMQ8WWX9 145 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 USP7Q93009 1102 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 PRR11Q96HE9 360 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 OR2A5Q96R48 311 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TAAR9Q96RI9 348 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 KCNA7Q96RP8 456 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ILKAPQ9H0C8 392 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ZNF395Q9H8N7 513 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 APMAPQ9HDC9 416 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 FBXO8Q9NRD0 319 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 THAP1Q9NVV9 213 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 SIDT1Q9NXL6 827 aaKnown RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TRPS1Q9UHF7 1281 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ZFP69BQ9UJL9 534 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ZNF490Q9ULM2 529 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TRAF6Q9Y4K3 522 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 TIMM22Q9Y584 194 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 PCDHGA4Q9Y5G9 962 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 AK5Q9Y6K8 562 aa9.71□□□□□ -0.86
CPSF7-221ENST00000543545 ZFC3H1O60293 1989 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms