RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TSC22D4Q9Y3Q8 395 aa22.13■■□□□ 1.13
HOMER3-205ENST00000542541 ANKDD1BA6NHY2 528 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 NRP2O60462 931 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 LYPLA1O75608 230 aaPredicted RBP22.12■■□□□ 1.13
HOMER3-205ENST00000542541 KRT6AP02538 564 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 KRT6BP04259 564 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 CAPN1P07384 714 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 UROSP10746 265 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 ARRB2P32121 409 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 KRT6CP48668 564 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 EIF3IQ13347 325 aaKnown RBP22.12■■□□□ 1.13
HOMER3-205ENST00000542541 C16orf72Q14CZ0 275 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 CLYBLQ8N0X4 340 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 OR7G3Q8NG95 312 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 LIN37Q96GY3 246 aaPredicted RBP22.12■■□□□ 1.13
HOMER3-205ENST00000542541 OR2A5Q96R48 311 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 ELOVL6Q9H5J4 265 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 ZFP69BQ9UJL9 534 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 TRAF6Q9Y4K3 522 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 PCDHGA4Q9Y5G9 962 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 AP1M2Q9Y6Q5 423 aa22.12■■□□□ 1.13
HOMER3-205ENST00000542541 AZIN1O14977 448 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 LCMT2O60294 686 aaKnown RBP22.11■■□□□ 1.13
HOMER3-205ENST00000542541 CHEK2O96017 543 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 BCL6P41182 706 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 PHEXP78562 749 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 CYP4F3Q08477 520 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 IFT88Q13099 833 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 KCNAB1Q14722 419 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 SH2D4BQ5SQS7 431 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 FRG2Q64ET8 278 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 AFAP1L2Q8N4X5 818 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 TRPV3Q8NET8 790 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 FRG2BQ96QU4 278 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 C20orf27Q9GZN8 174 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 RHBGQ9H310 441 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 ZNF395Q9H8N7 513 aaPredicted RBP22.11■■□□□ 1.13
HOMER3-205ENST00000542541 PRM3Q9NNZ6 103 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 SPTBN4Q9H254 2564 aa22.11■■□□□ 1.13
HOMER3-205ENST00000542541 CNOT1A5YKK6 2376 aaKnown RBP22.11■■□□□ 1.13
HOMER3-205ENST00000542541 TXNDC9O14530 226 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 FFAR3O14843 346 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 GPR42O15529 346 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 PCNAP12004 261 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 FOLR1P15328 257 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 OCRLQ01968 901 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 ZNF33BQ06732 778 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 TCTE1Q5JU00 501 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 BPHLQ86WA6 291 aaPredicted RBP22.1■■□□□ 1.13
HOMER3-205ENST00000542541 ZNF655Q8N720 491 aaPredicted RBP22.1■■□□□ 1.13
HOMER3-205ENST00000542541 FCRL4Q96PJ5 515 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 SORT1Q99523 831 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 FGF21Q9NSA1 209 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 HAO1Q9UJM8 370 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 SERTAD3Q9UJW9 196 aa22.1■■□□□ 1.13
HOMER3-205ENST00000542541 ULK1O75385 1050 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 PIK3CBP42338 1070 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 GABRA4P48169 554 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 RPL14P50914 215 aaKnown RBP22.09■■□□□ 1.13
HOMER3-205ENST00000542541 CLDN6P56747 220 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 OR8K5Q8NH50 307 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 C7orf26Q96N11 449 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 NLNQ9BYT8 704 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 CCDC134Q9H6E4 229 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 ZDHHC2Q9UIJ5 367 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 TIMM22Q9Y584 194 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 CCDC187A0A096LP49 1063 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 EFCAB7A8K855 629 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 H0YGG7 62 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 POLR3GO15318 223 aaPredicted RBP22.09■■□□□ 1.13
HOMER3-205ENST00000542541 ARF3P61204 181 aaPredicted RBP22.09■■□□□ 1.13
HOMER3-205ENST00000542541 FOXM1Q08050 763 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 TUBB3Q13509 450 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 PWP1Q13610 501 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 DEFB110Q30KQ9 67 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 FRMPD2BQ6IN97 320 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 ATG14Q6ZNE5 492 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 RAB11FIP2Q7L804 512 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 ASPGQ86U10 573 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 CRLF3Q8IUI8 442 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 ANKRD53Q8N9V6 530 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 CAMKVQ8NCB2 501 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 WDR20Q8TBZ3 569 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 AGR3Q8TD06 166 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 SLC13A3Q8WWT9 602 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 KCNA7Q96RP8 456 aa22.09■■□□□ 1.13
HOMER3-205ENST00000542541 HEATR5BQ9P2D3 2071 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 LOC105369274A0A096LPK9 316 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 LOC102723532A0A0G2JNH3 316 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 MANBAO00462 879 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 CLEC3AO75596 197 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 SNRNP200O75643 2136 aaKnown RBP22.08■■□□□ 1.13
HOMER3-205ENST00000542541 SLC35G6P0C7Q6 338 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 FOXA1P55317 472 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 VSX2P58304 361 aaPredicted RBP22.08■■□□□ 1.13
HOMER3-205ENST00000542541 TARDBPQ13148 414 aaKnown RBP eCLIP22.08■■□□□ 1.13
HOMER3-205ENST00000542541 IL11RAQ14626 422 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 GPR19Q15760 415 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 MANEAQ5SRI9 462 aa22.08■■□□□ 1.13
HOMER3-205ENST00000542541 KANK2Q63ZY3 851 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms