RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 MOCOSQ96EN8 888 aa18.8■□□□□ 0.6
DDX11-220ENST00000542244 CCDC68Q9H2F9 335 aa18.8■□□□□ 0.6
DDX11-220ENST00000542244 OLAHQ9NV23 265 aa18.8■□□□□ 0.6
DDX11-220ENST00000542244 TMEM184CQ9NVA4 438 aa18.8■□□□□ 0.6
DDX11-220ENST00000542244 IKZF3Q9UKT9 509 aa18.8■□□□□ 0.6
DDX11-220ENST00000542244 VPS9D1Q9Y2B5 631 aa18.8■□□□□ 0.6
DDX11-220ENST00000542244 ENO3P13929 434 aaPredicted RBP18.79■□□□□ 0.6
DDX11-220ENST00000542244 MEF2AQ02078 507 aaPredicted RBP18.79■□□□□ 0.6
DDX11-220ENST00000542244 DHX9Q08211 1270 aaKnown RBP18.79■□□□□ 0.6
DDX11-220ENST00000542244 FAM53BQ14153 422 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 CRYMQ14894 314 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 ARMC3Q5W041 872 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 HIBCHQ6NVY1 386 aaPredicted RBP18.79■□□□□ 0.6
DDX11-220ENST00000542244 FAM180AQ6UWF9 173 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 FJX1Q86VR8 437 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 SLC35F6Q8N357 371 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.79■□□□□ 0.6
DDX11-220ENST00000542244 C2CD4AQ8NCU7 369 aaPredicted RBP18.79■□□□□ 0.6
DDX11-220ENST00000542244 OR51Q1Q8NH59 317 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 HAS2Q92819 552 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 TM4SF19Q96DZ7 209 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 PBKQ96KB5 322 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 CYTH2Q99418 400 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 WDR83Q9BRX9 315 aaKnown RBP18.79■□□□□ 0.6
DDX11-220ENST00000542244 RBCK1Q9BYM8 510 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 CCDC177Q9NQR7 707 aaPredicted RBP18.79■□□□□ 0.6
DDX11-220ENST00000542244 RIC8BQ9NVN3 520 aa18.79■□□□□ 0.6
DDX11-220ENST00000542244 SVILO95425 2214 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 CPAMD8Q8IZJ3 1885 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 ZNF860A6NHJ4 632 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 ZNF839A8K0R7 811 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 PCDH17O14917 1159 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 NRDCO43847 1150 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 WFS1O76024 890 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 TSPAN12O95859 305 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 C8orf89P0DMQ9 161 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 CDH1P12830 882 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 PRF1P14222 555 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 NAE1Q13564 534 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 HP1BP3Q5SSJ5 553 aaPredicted RBP18.78■□□□□ 0.6
DDX11-220ENST00000542244 TMEM214Q6NUQ4 689 aaKnown RBP18.78■□□□□ 0.6
DDX11-220ENST00000542244 AGTRAPQ6RW13 159 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 SLC26A11Q86WA9 606 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 ZGRF1Q86YA3 2104 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 BCORP1Q8N888 145 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 OR5T3Q8NGG3 340 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 PYCR2Q96C36 320 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 VPS50Q96JG6 964 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 NPAS2Q99743 824 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 TRMT6Q9UJA5 497 aaKnown RBP18.78■□□□□ 0.6
DDX11-220ENST00000542244 JRKLQ9Y4A0 524 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 SCN3AQ9NY46 2000 aa18.78■□□□□ 0.6
DDX11-220ENST00000542244 KCNE1BA0A087WTH5 132 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 DYTNA2CJ06 578 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 PRPF4O43172 522 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDX11-220ENST00000542244 RDH16O75452 317 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 NSA2O95478 260 aaKnown RBP18.77■□□□□ 0.6
DDX11-220ENST00000542244 AHSGP02765 367 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 STSP08842 583 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 XCR1P46094 333 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 ZRSR2Q15696 482 aaKnown RBP18.77■□□□□ 0.6
DDX11-220ENST00000542244 MINDY4Q4G0A6 757 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 PPIL6Q8IXY8 311 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 NR4A3Q92570 626 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 OR4K3Q96R72 315 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 OSBPL9Q96SU4 736 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 HES7Q9BYE0 225 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDX11-220ENST00000542244 SPNS1Q9H2V7 528 aa18.77■□□□□ 0.6
DDX11-220ENST00000542244 TRAV17A0A0B4J275 112 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 A8MUI8 341 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 PGRMC1O00264 195 aaKnown RBP18.76■□□□□ 0.59
DDX11-220ENST00000542244 NPPBP16860 134 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 AVPR1BP47901 424 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 ZNF33BQ06732 778 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 MFSD4BQ5TF39 518 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 CPEB2Q7Z5Q1 589 aaKnown RBP18.76■□□□□ 0.59
DDX11-220ENST00000542244 ANKRD37Q7Z713 158 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 ZNF740Q8NDX6 193 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 TSLPQ969D9 159 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 LINGO1Q96FE5 620 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 EBNA1BP2Q99848 306 aaKnown RBP18.76■□□□□ 0.59
DDX11-220ENST00000542244 FAM167BQ9BTA0 163 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 SGPP1Q9BX95 441 aa18.76■□□□□ 0.59
DDX11-220ENST00000542244 DDX47Q9H0S4 455 aaKnown RBP18.76■□□□□ 0.59
DDX11-220ENST00000542244 UTP6Q9NYH9 597 aaKnown RBP18.76■□□□□ 0.59
DDX11-220ENST00000542244 DIDO1Q9BTC0 2240 aaKnown RBP18.76■□□□□ 0.59
DDX11-220ENST00000542244 H0YIG0 161 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 TXNDC9O14530 226 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 CDC123O75794 336 aaPredicted RBP18.75■□□□□ 0.59
DDX11-220ENST00000542244 PGAM1P18669 254 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 FDXRP22570 491 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 IVDP26440 423 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 GRNP28799 593 aaKnown RBP18.75■□□□□ 0.59
DDX11-220ENST00000542244 RPS15AP62244 130 aaKnown RBP18.75■□□□□ 0.59
DDX11-220ENST00000542244 OLR1P78380 273 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 NDUFA9Q16795 377 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 TRMT10BQ6PF06 316 aaKnown RBP18.75■□□□□ 0.59
DDX11-220ENST00000542244 RIPOR1Q6ZS17 1223 aa18.75■□□□□ 0.59
DDX11-220ENST00000542244 BEST3Q8N1M1 668 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms